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The map label for this gene is hxuB [H]

Identifier: 170025530

GI number: 170025530

Start: 3633801

End: 3635591

Strand: Reverse

Name: hxuB [H]

Synonym: YPK_3313

Alternate gene names: 170025530

Gene position: 3635591-3633801 (Counterclockwise)

Preceding gene: 170025531

Following gene: 170025529

Centisome position: 77.53

GC content: 45.62

Gene sequence:

>1791_bases
ATGAGAGATTGCTATTGCCATGGCATGTTATGGTTCCCATTAAAATTCAGTTTATTAGCTTTATTTTCTCTTTCTTGCTC
ACCATTAATCGCCACACCTCAAGTGCTAAATGTGCCAAACGCAGGGGCGATTAGTAATGAAATTAGGCAAACAACAATAG
AGCCATTGAACGCCCCAGAGGAAACGGATATCAAGCTTCCTCAATTAAATAAGCCCACGCCACCAGAAGGGGGACTCGCG
ACTGAACGCATTACCCTGCACAGGGTTAGGTTTGAAGGCGATGTCTCGTTATTTCAGCCTGGTATTACCGCTGACAATAA
GGATTTACAGGCGCTGATTACCCCTTGGTTAAATCGGTCACTCACATTTAACGATTTACAAGCCATGACTTTTGCCGTGA
CTCGCTTCTATCGGAAAAAAGGGTGGGTCGCAGCTCAGGCAATATTACCACCACAAACGATTCGGGACGGTATTATTGTG
GTGCGCGTTATCGCGGGCCGATTAGATAAGCCTCAGATAAATAACCAAAGTAGTTTGAATTCTCACTTTATCACCACGGT
GATTGAAAGTAATAGCTGCAGTAAAAAAAATGGGATCTTTGGTGATAAAGATTGTGCCGCGTCTCCCGTTGAATTATCTC
GCCTTGAACGCACGGCGCTAATTTTGAATGAAATACCGGGCGTTGAGGCTTCTTTGGCATTAAAACCGGGCACTCAATCT
GGAATGACTCGGATTTATGCTGATGTTACACCCGGAAAAAAAATGATGGCTTATCTTGCGGCCGATAATCAGGGAAATGA
TTATTCCGGTCATAATCGTTTGTTAACCGGCGGTGTGCTTAATAACCTCACTGGCTGGGGAGATCAATTACGGGCAGATT
TAATTTTATCCAGCTCGGCAGATGTCTTTAATGGTTTACTGGATTATAACTTCCCCATTAATAGCTATGGTACCCGGGCT
GCACTTAATTATAGCTACCTGGATTATACGTTAACGGGGCCTTTCTCCGTATTAGATGCACGTGGTCACTCTACTACCTG
GGGCATCAATTTACGACATCCATGGATACGCACCTCTGCTGCACGAATTGATGTCAATGCGGGTTATTATCAGGCCAGAA
TGCGTGATGCATTAATCTTGTTACCAGAACAAAAACGTAACCTGAATGCGGGCGAATTTGGTATCAGTGGCACTTTTACT
GCCTTACCCCGTGGGCTCAGTAATTTCAATTTACTGGGCACGGCAGGGGATCTTGCACTGGATGACGAATACAGCCAAAG
CATAAATACGCTGACCCATGTGAGCGGTAATTTTAGCCGCTTTAATTATCGCGTCGGCCATGATCAGGGCATTGGGTCTC
ACGTCTCTTTCTTTAATCAATTTACCGGTCAAATGGCCAGTAAAAATCTGGATAGTTCGCAAAAATTACTCTTGGGCGGG
CCACTGGCGGTTCGTGCCTATGGTATTGGCGACGGTTCTGTCGATAAAGGGACGATTTTTACCACGGAATTACGCACACG
CTGGCAGCCTGATTTTCCTGACTGGGCCGGCTATGGGCATCAAATTACCGTAGCGGCGTTTTTTGACCAAGGGTGGGGGG
CTTATTATCGCCAGCCTATCGTGGGCCTCTCTGAAAATAATATCAACATATCTGGCTTTGGTTCCTATATCACTTTCGCA
CGCCCGGCAGATTATTTTTTGAATCTGACCTGGGCACACCGAACCGGTCAGGCAGTGACCCGTCATCAAGATAACGATCA
GCTCTGGTTAAGTGCTTATAAGATGTTTTAG

Upstream 100 bases:

>100_bases
GCATTTATTAATTAATGATAACCGTATGGGCCAGTGCTAAATAATAATATTTATTGTTATTTTTACTGGCATTACCCCTG
TTTTTATTAGGCGTTTCTTT

Downstream 100 bases:

>100_bases
TGCTTATCGGCATATTTGTCAGATTTAATGGACGCGCATAATGAACAGTAAATTGTACAAACTTATTTTTTGTCGTCGGC
TGGGCTGCTTAATTGCCGTG

Product: polypeptide-transport-associated domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAISNEIRQTTIEPLNAPEETDIKLPQLNKPTPPEGGLA
TERITLHRVRFEGDVSLFQPGITADNKDLQALITPWLNRSLTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIV
VRVIAGRLDKPQINNQSSLNSHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALILNEIPGVEASLALKPGTQS
GMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLNNLTGWGDQLRADLILSSSADVFNGLLDYNFPINSYGTRA
ALNYSYLDYTLTGPFSVLDARGHSTTWGINLRHPWIRTSAARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTFT
ALPRGLSNFNLLGTAGDLALDDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFFNQFTGQMASKNLDSSQKLLLGG
PLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAGYGHQITVAAFFDQGWGAYYRQPIVGLSENNINISGFGSYITFA
RPADYFLNLTWAHRTGQAVTRHQDNDQLWLSAYKMF

Sequences:

>Translated_596_residues
MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAISNEIRQTTIEPLNAPEETDIKLPQLNKPTPPEGGLA
TERITLHRVRFEGDVSLFQPGITADNKDLQALITPWLNRSLTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIV
VRVIAGRLDKPQINNQSSLNSHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALILNEIPGVEASLALKPGTQS
GMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLNNLTGWGDQLRADLILSSSADVFNGLLDYNFPINSYGTRA
ALNYSYLDYTLTGPFSVLDARGHSTTWGINLRHPWIRTSAARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTFT
ALPRGLSNFNLLGTAGDLALDDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFFNQFTGQMASKNLDSSQKLLLGG
PLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAGYGHQITVAAFFDQGWGAYYRQPIVGLSENNINISGFGSYITFA
RPADYFLNLTWAHRTGQAVTRHQDNDQLWLSAYKMF
>Mature_596_residues
MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAISNEIRQTTIEPLNAPEETDIKLPQLNKPTPPEGGLA
TERITLHRVRFEGDVSLFQPGITADNKDLQALITPWLNRSLTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIV
VRVIAGRLDKPQINNQSSLNSHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALILNEIPGVEASLALKPGTQS
GMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLNNLTGWGDQLRADLILSSSADVFNGLLDYNFPINSYGTRA
ALNYSYLDYTLTGPFSVLDARGHSTTWGINLRHPWIRTSAARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTFT
ALPRGLSNFNLLGTAGDLALDDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFFNQFTGQMASKNLDSSQKLLLGG
PLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAGYGHQITVAAFFDQGWGAYYRQPIVGLSENNINISGFGSYITFA
RPADYFLNLTWAHRTGQAVTRHQDNDQLWLSAYKMF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 65816; Mature: 65816

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAISNEIRQTTIEPLNAPE
CCCEEECCEEEHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCC
ETDIKLPQLNKPTPPEGGLATERITLHRVRFEGDVSLFQPGITADNKDLQALITPWLNRS
CCCCCCCCCCCCCCCCCCCEECEEEEEEEEECCCHHEECCCCCCCCCHHHHHHHHHHCCC
LTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIVVRVIAGRLDKPQINNQSSLN
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCEEEEEEHHCCCCCCCCCCCCCCC
SHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALILNEIPGVEASLALKPGTQS
CEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
GMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLNNLTGWGDQLRADLILSSSA
CCEEEEEECCCCHHEEEEEEECCCCCCCCCCCEEEECHHHHCCCCCCHHHEEEEEECCCC
DVFNGLLDYNFPINSYGTRAALNYSYLDYTLTGPFSVLDARGHSTTWGINLRHPWIRTSA
HHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCEECCC
ARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTFTALPRGLSNFNLLGTAGDLAL
EEEEECCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEE
DDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFFNQFTGQMASKNLDSSQKLLLGG
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC
PLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAGYGHQITVAAFFDQGWGAYYRQPI
CEEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCHHCCCCCEEEEEEEEECCCCHHHHCCC
VGLSENNINISGFGSYITFARPADYFLNLTWAHRTGQAVTRHQDNDQLWLSAYKMF
EECCCCCEEEEECCCEEEECCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAISNEIRQTTIEPLNAPE
CCCEEECCEEEHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCC
ETDIKLPQLNKPTPPEGGLATERITLHRVRFEGDVSLFQPGITADNKDLQALITPWLNRS
CCCCCCCCCCCCCCCCCCCEECEEEEEEEEECCCHHEECCCCCCCCCHHHHHHHHHHCCC
LTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIVVRVIAGRLDKPQINNQSSLN
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCEEEEEEHHCCCCCCCCCCCCCCC
SHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALILNEIPGVEASLALKPGTQS
CEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
GMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLNNLTGWGDQLRADLILSSSA
CCEEEEEECCCCHHEEEEEEECCCCCCCCCCCEEEECHHHHCCCCCCHHHEEEEEECCCC
DVFNGLLDYNFPINSYGTRAALNYSYLDYTLTGPFSVLDARGHSTTWGINLRHPWIRTSA
HHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCEECCC
ARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTFTALPRGLSNFNLLGTAGDLAL
EEEEECCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEE
DDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFFNQFTGQMASKNLDSSQKLLLGG
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC
PLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAGYGHQITVAAFFDQGWGAYYRQPI
CEEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCHHCCCCCEEEEEEEEECCCCHHHHCCC
VGLSENNINISGFGSYITFARPADYFLNLTWAHRTGQAVTRHQDNDQLWLSAYKMF
EECCCCCEEEEECCCEEEECCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]