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The map label for this gene is nqrF [H]

Identifier: 170025517

GI number: 170025517

Start: 3613382

End: 3614605

Strand: Reverse

Name: nqrF [H]

Synonym: YPK_3300

Alternate gene names: 170025517

Gene position: 3614605-3613382 (Counterclockwise)

Preceding gene: 170025518

Following gene: 170025516

Centisome position: 77.08

GC content: 45.59

Gene sequence:

>1224_bases
ATGGAAATAATTCTGGGCGTAGTTATGTTCACCCTCATCGTGCTGGCGCTGACGGTGATGATTTTATTCGCTAAATCAAA
ATTGGTGAATACCGGTGATATTACAGTTGAAATTAATGAAGACGAAGATAAAAGCTTTACCGCCCCGGCTGGGGATAAAT
TACTCAATATGCTGTCCAGCCATGGCATTTTTGTGTCGTCAGCCTGTGGTGGTGGCGGTTCTTGTGGGCAATGCCGTGTA
ACAATTAAAGAAGGTGGTGGGGATATTCTGCCCACTGAGCTTTCACATATTTCAAAACGGGAAGCCAAAGAAGGTTGTCG
TCTGGCTTGTCAGGTCAATGTTAAACAGAATCTGAAAATAGAGTTGCCAGAAGAAATTTTTGGGGTGAAAAAATGGACTT
GTGAAGTTATCTCGAATGATAACAAAGCTACCTTTATCAAAGAACTGAAGCTGAAAATACCTGATGGGGATGTCGTGCCA
TTCCGCGCGGGTGGCTTTATCCAAATTGAAGCGGAACCCCATACCGTTAAATACGCCGATTTTGACGTGCCAACTGAGTA
TCGTGGTGATTGGGATAAATTCAATCTGTTCCGGTTTGAATCTGTGGTCACGGAGCCAACCGTGCGGGCGTACTCCATGG
CAAACTACCCGGAAGAGCACGGTATCATCTTACTTAACGTGCGAATTGCCACGCCACCGCCATCGGTACCGGATGCACCT
CCTGGGATTATGTCTTCTTATATCTGGTCATTAAAACCGGGTGATAAAGTGGTTATCTCGGGTCCATTCGGCGAATTCTT
TGCAAAAGATACCGATGCGGAAATGGTCTTCATTGGCGGTGGGGCCGGCATGGCACCAATGCGCTCACATATTTTTGACC
AACTCAAACGGTTACACTCAAAACGTAAAATCAGCTTCTGGTATGGTGCGCGTTCACGGCGTGAAATGTTTTATGAAGAG
GATTTTGACCAGTTACAGGCTGAGAATGATAATTTCCGCTGGCACGTGGCGTTGTCTGATCCGCAACCTGAGGATAACTG
GACAGGTTATACCGGCTTTATTCATAACGTATTGCTGGAGAATTACCTGAAAGATCACCCGGCTCCAGAGGATTGTGAAT
TTTATATGTGTGGGCCGCCAATGATGAACGCTGCAGTGATCAAGATGCTGAAAGATCTTGGTGTAGAAGACGAAAATATT
ATGCTTGATGATTTCGGTGGCTGA

Upstream 100 bases:

>100_bases
GGGCTTACAGGGGCTAGGGATCACCTTTATCTCAACCGGATTGATGGCATTAGGTTTTATGTCTTTCGCCGGTGTGAACC
TATAAAGGCAGGAATAATTC

Downstream 100 bases:

>100_bases
TCCGGTCATCACTCGGGAATTCACAGTGGTTGGGGCGATTGTGCGCAAGTATATAACACGTTGTTTAATGTTGGTGATAG
GGGGCCTGCTGCTGAGTGGC

Product: Na(+)-translocating NADH-quinone reductase subunit F

Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]

Alternate protein names: Na(+)-NQR subunit F; Na(+)-translocating NQR subunit F; NQR complex subunit F; NQR-1 subunit F [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKSFTAPAGDKLLNMLSSHGIFVSSACGGGGSCGQCRV
TIKEGGGDILPTELSHISKREAKEGCRLACQVNVKQNLKIELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVP
FRAGGFIQIEAEPHTVKYADFDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGIILLNVRIATPPPSVPDAP
PGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEE
DFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIHNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENI
MLDDFGG

Sequences:

>Translated_407_residues
MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKSFTAPAGDKLLNMLSSHGIFVSSACGGGGSCGQCRV
TIKEGGGDILPTELSHISKREAKEGCRLACQVNVKQNLKIELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVP
FRAGGFIQIEAEPHTVKYADFDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGIILLNVRIATPPPSVPDAP
PGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEE
DFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIHNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENI
MLDDFGG
>Mature_407_residues
MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKSFTAPAGDKLLNMLSSHGIFVSSACGGGGSCGQCRV
TIKEGGGDILPTELSHISKREAKEGCRLACQVNVKQNLKIELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVP
FRAGGFIQIEAEPHTVKYADFDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGIILLNVRIATPPPSVPDAP
PGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEE
DFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIHNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENI
MLDDFGG

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by nqrF, which accepts electrons from NADH and reduces

COG id: COG2871

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323552, Length=191, Percent_Identity=27.2251308900524, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322146, Length=163, Percent_Identity=30.0613496932515, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323510, Length=154, Percent_Identity=25.3246753246753, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR010205
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.5.1.29 [C]

Molecular weight: Translated: 45456; Mature: 45456

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKSFTAPAGDKLLNMLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHH
HGIFVSSACGGGGSCGQCRVTIKEGGGDILPTELSHISKREAKEGCRLACQVNVKQNLKI
CCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEE
ELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVPFRAGGFIQIEAEPHTVKYAD
ECCHHHHCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEEC
FDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGIILLNVRIATPPPSVPDAP
CCCCCCCCCCCCCEEEEEHHHHHCCCCHHEEEECCCCCCCCEEEEEEEEECCCCCCCCCC
PGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLHS
CHHHHHHEEEECCCCEEEEECCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIHNVLLE
CCEEEEEECCCHHHHHHHHHCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
NYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIMLDDFGG
HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC
>Mature Secondary Structure
MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKSFTAPAGDKLLNMLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHH
HGIFVSSACGGGGSCGQCRVTIKEGGGDILPTELSHISKREAKEGCRLACQVNVKQNLKI
CCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEE
ELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVPFRAGGFIQIEAEPHTVKYAD
ECCHHHHCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEEC
FDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGIILLNVRIATPPPSVPDAP
CCCCCCCCCCCCCEEEEEHHHHHCCCCHHEEEECCCCCCCCEEEEEEEEECCCCCCCCCC
PGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLHS
CHHHHHHEEEECCCCEEEEECCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIHNVLLE
CCEEEEEECCCHHHHHHHHHCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
NYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIMLDDFGG
HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NAD(P)H2; FMN [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]

Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA