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The map label for this gene is insF1 [H]

Identifier: 170025360

GI number: 170025360

Start: 3432816

End: 3433055

Strand: Direct

Name: insF1 [H]

Synonym: YPK_3141

Alternate gene names: 170025360

Gene position: 3432816-3433055 (Clockwise)

Preceding gene: 170025359

Following gene: 170025362

Centisome position: 73.2

GC content: 54.58

Gene sequence:

>240_bases
ATGATAGCCTCCAGTTTGCGGTGTCAGGGCCCGCGGACAAAAACTTCACGCCGGTTCAGTCCGGTCAGCTACCTTGAGCA
CGGCCTGCTTGAGTCAGAAAACCTGCCGAAGCAGGACTTTTACGCCAGCGACCCGAACCAGAAGTTGTCGGGAGACATTA
CGTATCGGGATAGGCCGCTCGGGTGTGAGAGCATGCTTTACATGGAAATGCTTGCAGCGGTACTTTACAACCCGCAATAA

Upstream 100 bases:

>100_bases
TCCCCATCTGATTTAACTTCGCCAAAACCATGACACTATTGCTGCCCTTACCGGGACGCCTTAGAACTGCGCTTTATTCG
GCGCTCTGGAGACTAATACC

Downstream 100 bases:

>100_bases
ATCTTATCTCACATGGTAAACCTAAAAAATGGCGCTAACCGACTGTATTAGAAAGTTTATTACTATTCTGAATGCAAGGC
TTTTCTGAATGCAAGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MIASSLRCQGPRTKTSRRFSPVSYLEHGLLESENLPKQDFYASDPNQKLSGDITYRDRPLGCESMLYMEMLAAVLYNPQ

Sequences:

>Translated_79_residues
MIASSLRCQGPRTKTSRRFSPVSYLEHGLLESENLPKQDFYASDPNQKLSGDITYRDRPLGCESMLYMEMLAAVLYNPQ
>Mature_79_residues
MIASSLRCQGPRTKTSRRFSPVSYLEHGLLESENLPKQDFYASDPNQKLSGDITYRDRPLGCESMLYMEMLAAVLYNPQ

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=54, Percent_Identity=70.3703703703704, Blast_Score=79, Evalue=5e-17,
Organism=Escherichia coli, GI1787263, Length=54, Percent_Identity=70.3703703703704, Blast_Score=79, Evalue=5e-17,
Organism=Escherichia coli, GI1786753, Length=54, Percent_Identity=70.3703703703704, Blast_Score=79, Evalue=5e-17,
Organism=Escherichia coli, GI1786570, Length=54, Percent_Identity=70.3703703703704, Blast_Score=79, Evalue=5e-17,
Organism=Escherichia coli, GI1786490, Length=54, Percent_Identity=70.3703703703704, Blast_Score=79, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 9017; Mature: 9017

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASSLRCQGPRTKTSRRFSPVSYLEHGLLESENLPKQDFYASDPNQKLSGDITYRDRPL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GCESMLYMEMLAAVLYNPQ
CHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIASSLRCQGPRTKTSRRFSPVSYLEHGLLESENLPKQDFYASDPNQKLSGDITYRDRPL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GCESMLYMEMLAAVLYNPQ
CHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]