| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025343
Identifier: 170025343
GI number: 170025343
Start: 3419802
End: 3420194
Strand: Reverse
Name: 170025343
Synonym: YPK_3124
Alternate gene names: NA
Gene position: 3420194-3419802 (Counterclockwise)
Preceding gene: 170025344
Following gene: 170025342
Centisome position: 72.93
GC content: 50.64
Gene sequence:
>393_bases ATGGCAAAACCAGCAAAGCAACAACCGACTATCAATGAACTGGGCGGCTTGCCGCCCGAGTTCGAGGCTGATACCCAACA GGAACAGAATGATAACAAAGTCCTTTCTGTTCCTGATGTTCAGGAACGTACCGCAGAGAACGAGACTGAGGGTGATGATT CGACGAGCGACAGTGACGAGATGGAGGTTGTTGTCGTAAAAGGCCAGACTCTGCGCCATAGCGGGGAAACTCATGTGGAG AATAGCCGTTTATTCCTGCCACATGATGACGCTGAACGACTGATTAGCCTGGGCGTGGTTGCTGATGTGAAAGCATTACG GCAGCAGGCGGCTAATACTATTGGCCCTTCAATCACCGTTGATGATGGTGTAAAGATAAACCGAGGTGGCTGA
Upstream 100 bases:
>100_bases ATTATGCCTGACCCGGCACAGCGTTACCTGTTGATGCAATCTGCCCCACTGGTCATTCCAAGCCGGGTAAATGCCTCACT CTGTGCGACGGTGGTGTGAT
Downstream 100 bases:
>100_bases TGGGTATCAACTGGGATCAGCATCTTCTGGCACCCCTACAGGCGGTATTTGGTGACCCGGTTAATTACCGACCCGCTGGT GGTAAGCCCACTTATACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAKPAKQQPTINELGGLPPEFEADTQQEQNDNKVLSVPDVQERTAENETEGDDSTSDSDEMEVVVVKGQTLRHSGETHVE NSRLFLPHDDAERLISLGVVADVKALRQQAANTIGPSITVDDGVKINRGG
Sequences:
>Translated_130_residues MAKPAKQQPTINELGGLPPEFEADTQQEQNDNKVLSVPDVQERTAENETEGDDSTSDSDEMEVVVVKGQTLRHSGETHVE NSRLFLPHDDAERLISLGVVADVKALRQQAANTIGPSITVDDGVKINRGG >Mature_129_residues AKPAKQQPTINELGGLPPEFEADTQQEQNDNKVLSVPDVQERTAENETEGDDSTSDSDEMEVVVVKGQTLRHSGETHVEN SRLFLPHDDAERLISLGVVADVKALRQQAANTIGPSITVDDGVKINRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14074; Mature: 13942
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPAKQQPTINELGGLPPEFEADTQQEQNDNKVLSVPDVQERTAENETEGDDSTSDSDE CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC MEVVVVKGQTLRHSGETHVENSRLFLPHDDAERLISLGVVADVKALRQQAANTIGPSITV EEEEEECCCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DDGVKINRGG CCCEEEECCC >Mature Secondary Structure AKPAKQQPTINELGGLPPEFEADTQQEQNDNKVLSVPDVQERTAENETEGDDSTSDSDE CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC MEVVVVKGQTLRHSGETHVENSRLFLPHDDAERLISLGVVADVKALRQQAANTIGPSITV EEEEEECCCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DDGVKINRGG CCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA