| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025324
Identifier: 170025324
GI number: 170025324
Start: 3404877
End: 3405458
Strand: Direct
Name: 170025324
Synonym: YPK_3105
Alternate gene names: NA
Gene position: 3404877-3405458 (Clockwise)
Preceding gene: 170025323
Following gene: 170025326
Centisome position: 72.61
GC content: 37.29
Gene sequence:
>582_bases TTGAAAAAAATCATAGTAGACACCAACATCCTAATTTGTTTGATGAAAAAACATACACCTAGTGTAAATCTTCTTGGTGA AGATGGGTTCACAAAGATAGACAATCTTGAGCTGAGATCTAAGGCGCTGCTCGATCACATTGAACGCAACGGCGGCACTA TAGCCATACCAACTCCTGTTCTTGCTGAGTACCTCCTTGGAATTGATGGGGAGAGAAATAAACATGCTCATGTAGAACAA ATATTGAGCATGAACTGTTTTGAAATAATTCCTTTTGAAGAGCTAGCGGCGGTAGAGTGCTCATTACTCCCTTCATTTCA AGAGTTTAAACAGTTTTCTAAACAAATAAATTCAAATCAAACAGCCAATAAAATACGATTTGATAGACAAATAATATCAA TTGCTAAGGCAAACGGAATCACCGAGATATGGAGTTCTGACGGTGAAGTGATAAAAAAAGGAAAAGAGGTTGGGATTGAA GTTAAATCGATCTCAGAAATACAGCCTATTCCTCTATCCGATCAGTTCGCTCTTAACTTGCTTAATGACACTCCTCCGCC AAATAAGAGTCAAATAAATTAA
Upstream 100 bases:
>100_bases AAATCTCGGAAGGGCTTGACCGCTTATCTAGTGATCCTGCAAACAAATGGGATGAAATAGAAAATCAGGGTGAGCTGATA CTGAAGTACAGGAGTTTCAG
Downstream 100 bases:
>100_bases CTTTTAACCCGGCCCCGCTGCCGGGTTTTTTGTGCCTGTAATCTGACTATCTCACCGCCCTATCCGCGTTAACCCCTTTC TAACGGCCACTCGGTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKKIIVDTNILICLMKKHTPSVNLLGEDGFTKIDNLELRSKALLDHIERNGGTIAIPTPVLAEYLLGIDGERNKHAHVEQ ILSMNCFEIIPFEELAAVECSLLPSFQEFKQFSKQINSNQTANKIRFDRQIISIAKANGITEIWSSDGEVIKKGKEVGIE VKSISEIQPIPLSDQFALNLLNDTPPPNKSQIN
Sequences:
>Translated_193_residues MKKIIVDTNILICLMKKHTPSVNLLGEDGFTKIDNLELRSKALLDHIERNGGTIAIPTPVLAEYLLGIDGERNKHAHVEQ ILSMNCFEIIPFEELAAVECSLLPSFQEFKQFSKQINSNQTANKIRFDRQIISIAKANGITEIWSSDGEVIKKGKEVGIE VKSISEIQPIPLSDQFALNLLNDTPPPNKSQIN >Mature_193_residues MKKIIVDTNILICLMKKHTPSVNLLGEDGFTKIDNLELRSKALLDHIERNGGTIAIPTPVLAEYLLGIDGERNKHAHVEQ ILSMNCFEIIPFEELAAVECSLLPSFQEFKQFSKQINSNQTANKIRFDRQIISIAKANGITEIWSSDGEVIKKGKEVGIE VKSISEIQPIPLSDQFALNLLNDTPPPNKSQIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21533; Mature: 21533
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIVDTNILICLMKKHTPSVNLLGEDGFTKIDNLELRSKALLDHIERNGGTIAIPTPV CCEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHH LAEYLLGIDGERNKHAHVEQILSMNCFEIIPFEELAAVECSLLPSFQEFKQFSKQINSNQ HHHHHHCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCC TANKIRFDRQIISIAKANGITEIWSSDGEVIKKGKEVGIEVKSISEIQPIPLSDQFALNL CHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCHHHCCEEEECCCCCCCCCCCHHHHHHH LNDTPPPNKSQIN HCCCCCCCCCCCC >Mature Secondary Structure MKKIIVDTNILICLMKKHTPSVNLLGEDGFTKIDNLELRSKALLDHIERNGGTIAIPTPV CCEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHH LAEYLLGIDGERNKHAHVEQILSMNCFEIIPFEELAAVECSLLPSFQEFKQFSKQINSNQ HHHHHHCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCC TANKIRFDRQIISIAKANGITEIWSSDGEVIKKGKEVGIEVKSISEIQPIPLSDQFALNL CHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCHHHCCEEEECCCCCCCCCCCHHHHHHH LNDTPPPNKSQIN HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA