| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025320
Identifier: 170025320
GI number: 170025320
Start: 3402477
End: 3402683
Strand: Reverse
Name: 170025320
Synonym: YPK_3101
Alternate gene names: NA
Gene position: 3402683-3402477 (Counterclockwise)
Preceding gene: 170025325
Following gene: 170025319
Centisome position: 72.56
GC content: 49.28
Gene sequence:
>207_bases ATGAACAAAATGACTTTGGCCGATTACGCAGAGATTCACGGGCAAGCAAAGGCCGCTAGTGATTTCGGCGTTATCCAGTG CGCAATCAGTAAAGCTAGCAAGGCTGCGAGAAATGAAGTCATAGCTATTGTTACCCAACAACTCGACCGCGCTATGGGGC AAAGTGGGCGCATCACCAATTTTGTCACTAACAGAGCGGGGCGTTAA
Upstream 100 bases:
>100_bases TCATTCTAATAGCGATAGTATTTAACGCGAAATATCTGAGGTATTGAATATAATAAATACCTGTAGTATTCTTTGTTTGA TACAAAAATGGAGTGTGTCT
Downstream 100 bases:
>100_bases GAATGGCAATTGAAACATTTCTTTGGCGAACTCAGGGCGTCCCAGAAGGTAGCTTTAACCAGCGGGTCAGAACCGCTCAG TTCGGCGATGGCTATAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MNKMTLADYAEIHGQAKAASDFGVIQCAISKASKAARNEVIAIVTQQLDRAMGQSGRITNFVTNRAGR
Sequences:
>Translated_68_residues MNKMTLADYAEIHGQAKAASDFGVIQCAISKASKAARNEVIAIVTQQLDRAMGQSGRITNFVTNRAGR >Mature_68_residues MNKMTLADYAEIHGQAKAASDFGVIQCAISKASKAARNEVIAIVTQQLDRAMGQSGRITNFVTNRAGR
Specific function: Unknown
COG id: COG5281
COG function: function code S; Phage-related minor tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7296; Mature: 7296
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMTLADYAEIHGQAKAASDFGVIQCAISKASKAARNEVIAIVTQQLDRAMGQSGRITN CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FVTNRAGR HHHCCCCC >Mature Secondary Structure MNKMTLADYAEIHGQAKAASDFGVIQCAISKASKAARNEVIAIVTQQLDRAMGQSGRITN CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FVTNRAGR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA