| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025312
Identifier: 170025312
GI number: 170025312
Start: 3396785
End: 3397783
Strand: Reverse
Name: 170025312
Synonym: YPK_3093
Alternate gene names: NA
Gene position: 3397783-3396785 (Counterclockwise)
Preceding gene: 170025313
Following gene: 170025311
Centisome position: 72.46
GC content: 44.14
Gene sequence:
>999_bases ATGGCTGAACCTATTCTATATATCTCCCCCAGTGATGGGGGGAAAGGCATTAATATGACGTCTGGCACTCGGCTATTAAA GTTTTTGGGATACTATGATACTAACGGTACGGGGAATCCGCCCTCTGCTGTATTGAATGGATATACCGGGGGGGCATTAT ATCTCGTGCCGTCCGATTTTGGCGGGGTGATACAACCGCTGGGCTCATCTGCGGTGTGGGCGTGGTGGGTTACTGGGTAT TCAATGTCTGGAAATCGAATAACATTCACTACATCAGAGAGCAATAAAGGATGGGTAAGATTTTCAGTATTTGAAATACC ACAATCGCCCGCAGTTGGTACATACGGACTTTTATTGCAAGATTCAGCAAATTTCATGGCAATAACTGAGTCTAGTGAGC TTGGCTTTTGCACGTGGCGCGGTAATGTAAATATATCTGGCGTTTGGTCGATTCCTGCCGGAATACAAAATAGAGATAAT GCAATTGTGTTTGCAAACTGGGATAACCCTAATGTTTCTCTTTATTACGACTCAGCAAATAAAACAATAAACTGCTATCA AATAAATTCAACGGGTAGCACAAGCTCAGGCTCTGTAAACGCCAATATTTGCGTATTCACAACAGGGTTCTTTCCTGAGC CGCCAAGCCCAGGAACTGCCGGGTTGGCGATATTCAACACAAGCGGTCAATGTACGTATTCATCAAGATATGCACCGTTA ATTATTGGCGGAAATATGGCGCTAAGCAACCAGCCAAACGTATGGGTTAATACCGGAATTACAAGGCCAATGATACCACT ACCGAGCGCCGGGGGGCTGCCAGCCGGTAATATAAATAATGGAAACTATAGGGGCTGGTATAAGTCAGCAATGAGAATGT CTGGTTCAAGTATAACAGCCGGGCAAGGTGCGTATGTTAATAGTTCAAATACACTCGATTATCCATACGGCATTTCTCCC ATCTCTATTCCTGTACTTAACGCGGACATTTATTTTTAA
Upstream 100 bases:
>100_bases TGGATAACACGATTAATGGTATTCGCACCATAGTAGATTATCGTGGGCAGAGGATATATCACGCAAATGGTCAGCCAGCG ATAATATGCGGGTACTTCTA
Downstream 100 bases:
>100_bases AATTAAGGATTAATATATGGCTTGGTACCGGTCAGGCACAGTCACGTCAGAAGCAGCACAAAATATAGTCACAGGAACAG GAACTCAGTGGGCCAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDFGGVIQPLGSSAVWAWWVTGY SMSGNRITFTTSESNKGWVRFSVFEIPQSPAVGTYGLLLQDSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDN AIVFANWDNPNVSLYYDSANKTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPL IIGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITAGQGAYVNSSNTLDYPYGISP ISIPVLNADIYF
Sequences:
>Translated_332_residues MAEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDFGGVIQPLGSSAVWAWWVTGY SMSGNRITFTTSESNKGWVRFSVFEIPQSPAVGTYGLLLQDSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDN AIVFANWDNPNVSLYYDSANKTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPL IIGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITAGQGAYVNSSNTLDYPYGISP ISIPVLNADIYF >Mature_331_residues AEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDFGGVIQPLGSSAVWAWWVTGYS MSGNRITFTTSESNKGWVRFSVFEIPQSPAVGTYGLLLQDSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDNA IVFANWDNPNVSLYYDSANKTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPLI IGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITAGQGAYVNSSNTLDYPYGISPI SIPVLNADIYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35276; Mature: 35145
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDF CCCCEEEECCCCCCCEEEECCCHHEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCC GGVIQPLGSSAVWAWWVTGYSMSGNRITFTTSESNKGWVRFSVFEIPQSPAVGTYGLLLQ CCHHHHCCCCEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEE DSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDNAIVFANWDNPNVSLYYDSAN CCCCEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCC KTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPL CEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCEE IIGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITA EEECCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEC GQGAYVNSSNTLDYPYGISPISIPVLNADIYF CCCEEECCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure AEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDF CCCEEEECCCCCCCEEEECCCHHEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCC GGVIQPLGSSAVWAWWVTGYSMSGNRITFTTSESNKGWVRFSVFEIPQSPAVGTYGLLLQ CCHHHHCCCCEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEE DSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDNAIVFANWDNPNVSLYYDSAN CCCCEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCC KTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPL CEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCEE IIGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITA EEECCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEC GQGAYVNSSNTLDYPYGISPISIPVLNADIYF CCCEEECCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA