Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025307

Identifier: 170025307

GI number: 170025307

Start: 3393275

End: 3393922

Strand: Direct

Name: 170025307

Synonym: YPK_3088

Alternate gene names: NA

Gene position: 3393275-3393922 (Clockwise)

Preceding gene: 170025306

Following gene: 170025308

Centisome position: 72.36

GC content: 42.44

Gene sequence:

>648_bases
ATGTCACCCAATTTAATTGCTGAACACGATAAAATATTAAAATGGCCGGAAGTTAATGATTTAGCTTCCGGCCATTTTTT
ATGGCTCCCTGAATTTAAAACCCCGAGTGGTGACCTCTTTCGAGCATTACTTGAAGATGATGGTAGCAATATGGCCCATC
TTCATATCAAAGAGAGACTTTCAGGTGAGCATATAGCAAGCTATGTTTTGACTTTCGACCTCACCCCACCACTGGATTTA
GGCCAACGTTTACCCCAAGTTGAATCAGCTTATGTCTCACAAGAATATCAAGGCGGGGGCGTGTCTACTGCCACCTATAA
AGCCATTATTGACCACTACGGTGCTGTAATAAGTGATACTTATCAGACTGAGGGCGGGATGGTGCTTTGGCTGTTTGGTC
TATCTAAAGATGACAGCATCCAGTTAACCATTCTAAATGTGGATGGTCATACGTTGGATTATAAAATTAACGAACACGGC
GAAAGGATCAGTTTTCAGGCAGATAGAAAGTCTTTACTGGAAATTGCCGATACGGTTTGGGGAAACCCGGATAATGTCGA
ACTGAGTAATCTGGAGACGTTGGGCTTTACACCATCCTGGCGTAATCACAGCAATCACGTTTTAGCCGCAACTAAATCTA
TTATCTAA

Upstream 100 bases:

>100_bases
TTAACCAAGCTTTTTTCTGGAATGATTTGCAGGATACCTCTATCGATTTCTCACAAAAGGCGGTTGATTTGTTCTTCAGT
AAGAAAGGAACTCTATCTGC

Downstream 100 bases:

>100_bases
ATCCCCTGATGGCTCCCCATAAATAAAGACAGACATATAGGATCGTGATCTACTTAGTGTTCCAGTAAAAAGTAAGGTCA
GTTAAAAGGAAGGAGAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFRALLEDDGSNMAHLHIKERLSGEHIASYVLTFDLTPPLDL
GQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDYKINEHG
ERISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII

Sequences:

>Translated_215_residues
MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFRALLEDDGSNMAHLHIKERLSGEHIASYVLTFDLTPPLDL
GQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDYKINEHG
ERISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII
>Mature_214_residues
SPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFRALLEDDGSNMAHLHIKERLSGEHIASYVLTFDLTPPLDLG
QRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDYKINEHGE
RISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23987; Mature: 23856

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFRALLEDDGSNMAHLHIKERL
CCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHC
SGEHIASYVLTFDLTPPLDLGQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDT
CHHHEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
YQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDYKINEHGERISFQADRKSLLEIADTVW
EECCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC
GNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII
CCCCCEEECCEEEECCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFRALLEDDGSNMAHLHIKERL
CCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHC
SGEHIASYVLTFDLTPPLDLGQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDT
CHHHEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
YQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDYKINEHGERISFQADRKSLLEIADTVW
EECCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC
GNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII
CCCCCEEECCEEEECCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA