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The map label for this gene is ynbC [H]

Identifier: 170025300

GI number: 170025300

Start: 3387847

End: 3389610

Strand: Reverse

Name: ynbC [H]

Synonym: YPK_3081

Alternate gene names: 170025300

Gene position: 3389610-3387847 (Counterclockwise)

Preceding gene: 170025301

Following gene: 170025299

Centisome position: 72.28

GC content: 52.04

Gene sequence:

>1764_bases
ATGAGTCAGGAAGTGCGTTTATTTCAAGAAGGCATGTTCACCGCCAGCGATGAAACATCGTTGTATTTTCGCCACTGGTC
TGCCACGGAAGGTAACAGCAAGAAAGTTATTGTGTTGTTTCATCGCGGGCATGAACACTCGGGGCGTCTGCAACATATTG
TGGATGAACTGATGATGCCCGATACCCATTTTTACGCGTGGGATGCGCGTGGACACGGGCAGTCGCCAGGGGCTCGTGGC
TACAGCCCCAGCCTTGCTCGCTCGGTTTTAGACGTGGATGAGTTTGTGCGTTTTGTGGCACAGGATGCGCAGGTCAACCT
CGACGATATCGTGATGATTGCGCAAAGCGTGGGGGCCGTGCTGGTATCAACCTGGGTTCATGACTACGCGCCGAAAATCC
GTGGCATGGTGCTGGCGTCCCCGGCATTTAAGGTCAAGCTGTATGTGCCGTTTGCCCGCCTGGGGCTGGGATTAATGCAG
CGTATACGTGGCCTGTTTTACGTGAATTCCTACGTGAAAGGGAAATTCCTCAGCCACGACCCCGAGCGCATCGCCAGCTT
TGAGCAGGACAAATTAATCACGCGCCAGATCGCCGTCAATATTTTGCTCGATCTCTACAAAACGGCTGAACGTATTGTTT
CAGACTCGACGGCGATTACTCTCCCGACCCAGTTGCTTATTTCCGGCGATGATTTTGTGGTGCATGAGAAACCGCAAAAA
CAATTTTATGCCGGTCTTCGCAGCGCGATAAAAGAGCAACATATTCTGCCGGGTTTCTATCACGACACGCTGGGTGAAAA
AGACCGCTCTATTGCTTTTGATAAAATGAAAAACTTTATCGACCGACTCTATGCAACTGCGCCTTATGCCTTTGATTATA
GCCATGAAGATCGCTGGAGTCCGAGTGCCGATGCGTATCGTGAATTGCAGGCTCCACCAAAATCACGCTCGCTGGAAGGG
ATGTTTTATGCTGCGCTAAGTTTCGGCATGAAGACCATCGGGCGACAGTCCAAAGGGATGCGCCTGGGTTATGAAACAGG
TTTTGACTCCGGCAGTACGCTGGATTACGTCTATCGTAATCAGCCTGAAGGTAATGGCATTCTGGGGCGTATGATTGACC
ACAACTATCTGAACAGCGTTGGCTGGCGTGGTATTCGCGTGCGTAAAGTGAATATCCAGCAGATGATTGAACAGGCCGTT
GCGAAGATTCAGCTCAGTCACATGCCGGTGCGAGTGGTCGATATCGCCGCCGGACATGGCCGCTATGTGCTGGATGCACT
GGAAAAACAGCAGGGTATCGAAAGTATACTGCTGCGTGATTACAGCGATTTGAATGTAGAAAAAGGTCAGGCGATGATCG
AAGAGCGTGGGCTAAGCCACGTCGCTCAGTTCAGAAAAGGCAACGCCTTCGACTATGATTCCCTTGCTACGCTCGATCCT
GCTCCGACGCTGGGCATTGTTTCCGGGCTGTATGAGCTCTTCCCGGATAACGACTTAATCAAAACGTCGTTGGCCGGGCT
GGCTGCGGCTATTCCACCAGGCGGCATGCTGGTATACACCGGGCAACCGTGGCACCCACAGTTAAAAACCATCGCGTATA
CCTTAACCAGCCATCAAAACGGGATCCCGTGGATGATGCGCGTGCGCAGCCAGAAAGAGATGGACACGCTGGTGGAGCAG
GCCGGCTTTGAAAAATGTCATCAGGTGATTGATGAGTTTGGCATTTTCACCGTGTCGCTGGCGGTGAGAAAGCAGCATGG
TTGA

Upstream 100 bases:

>100_bases
TCGACGACCCGCTGTTTTACGATGCGGAGAAAGTGACTTTTAAGCAATTACTCTTAAATCGTTTTGTCGCTTTACAGCAA
CTTGCCACAAGGAAAACCTC

Downstream 100 bases:

>100_bases
GTCCGCACTCACGCAGAACAAATACAGCCTCTGGAAACAGGGGGTGTGCTGGTTGTTGCTGTTGGGGCCGCTATTTTTCC
TCAGCTACGGGCAGGTGAAT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MSQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHEHSGRLQHIVDELMMPDTHFYAWDARGHGQSPGARG
YSPSLARSVLDVDEFVRFVAQDAQVNLDDIVMIAQSVGAVLVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQ
RIRGLFYVNSYVKGKFLSHDPERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLPTQLLISGDDFVVHEKPQK
QFYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFIDRLYATAPYAFDYSHEDRWSPSADAYRELQAPPKSRSLEG
MFYAALSFGMKTIGRQSKGMRLGYETGFDSGSTLDYVYRNQPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQAV
AKIQLSHMPVRVVDIAAGHGRYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGLSHVAQFRKGNAFDYDSLATLDP
APTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGMLVYTGQPWHPQLKTIAYTLTSHQNGIPWMMRVRSQKEMDTLVEQ
AGFEKCHQVIDEFGIFTVSLAVRKQHG

Sequences:

>Translated_587_residues
MSQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHEHSGRLQHIVDELMMPDTHFYAWDARGHGQSPGARG
YSPSLARSVLDVDEFVRFVAQDAQVNLDDIVMIAQSVGAVLVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQ
RIRGLFYVNSYVKGKFLSHDPERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLPTQLLISGDDFVVHEKPQK
QFYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFIDRLYATAPYAFDYSHEDRWSPSADAYRELQAPPKSRSLEG
MFYAALSFGMKTIGRQSKGMRLGYETGFDSGSTLDYVYRNQPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQAV
AKIQLSHMPVRVVDIAAGHGRYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGLSHVAQFRKGNAFDYDSLATLDP
APTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGMLVYTGQPWHPQLKTIAYTLTSHQNGIPWMMRVRSQKEMDTLVEQ
AGFEKCHQVIDEFGIFTVSLAVRKQHG
>Mature_586_residues
SQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHEHSGRLQHIVDELMMPDTHFYAWDARGHGQSPGARGY
SPSLARSVLDVDEFVRFVAQDAQVNLDDIVMIAQSVGAVLVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQR
IRGLFYVNSYVKGKFLSHDPERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLPTQLLISGDDFVVHEKPQKQ
FYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFIDRLYATAPYAFDYSHEDRWSPSADAYRELQAPPKSRSLEGM
FYAALSFGMKTIGRQSKGMRLGYETGFDSGSTLDYVYRNQPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQAVA
KIQLSHMPVRVVDIAAGHGRYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGLSHVAQFRKGNAFDYDSLATLDPA
PTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGMLVYTGQPWHPQLKTIAYTLTSHQNGIPWMMRVRSQKEMDTLVEQA
GFEKCHQVIDEFGIFTVSLAVRKQHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=584, Percent_Identity=64.8972602739726, Blast_Score=793, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 66120; Mature: 65989

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHEHSGRLQHIVDELMMP
CCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
DTHFYAWDARGHGQSPGARGYSPSLARSVLDVDEFVRFVAQDAQVNLDDIVMIAQSVGAV
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQRIRGLFYVNSYVKGKFLSHD
HHHHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLPTQLLISGDDFVVHEKPQK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEECCCCEEEECCHHH
QFYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFIDRLYATAPYAFDYSHEDRWS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
PSADAYRELQAPPKSRSLEGMFYAALSFGMKTIGRQSKGMRLGYETGFDSGSTLDYVYRN
CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEECC
QPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQAVAKIQLSHMPVRVVDIAAGHG
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCC
RYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGLSHVAQFRKGNAFDYDSLATLDP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGMLVYTGQPWHPQLKTIAYTLTSHQN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHEEEEECCCCC
GIPWMMRVRSQKEMDTLVEQAGFEKCHQVIDEFGIFTVSLAVRKQHG
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCCC
>Mature Secondary Structure 
SQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHEHSGRLQHIVDELMMP
CCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
DTHFYAWDARGHGQSPGARGYSPSLARSVLDVDEFVRFVAQDAQVNLDDIVMIAQSVGAV
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQRIRGLFYVNSYVKGKFLSHD
HHHHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLPTQLLISGDDFVVHEKPQK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEECCCCEEEECCHHH
QFYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFIDRLYATAPYAFDYSHEDRWS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
PSADAYRELQAPPKSRSLEGMFYAALSFGMKTIGRQSKGMRLGYETGFDSGSTLDYVYRN
CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEECC
QPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQAVAKIQLSHMPVRVVDIAAGHG
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCC
RYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGLSHVAQFRKGNAFDYDSLATLDP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGMLVYTGQPWHPQLKTIAYTLTSHQN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHEEEEECCCCC
GIPWMMRVRSQKEMDTLVEQAGFEKCHQVIDEFGIFTVSLAVRKQHG
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]