Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025280

Identifier: 170025280

GI number: 170025280

Start: 3365629

End: 3366006

Strand: Direct

Name: 170025280

Synonym: YPK_3059

Alternate gene names: NA

Gene position: 3365629-3366006 (Clockwise)

Preceding gene: 170025279

Following gene: 170025284

Centisome position: 71.77

GC content: 33.33

Gene sequence:

>378_bases
GTGGTTAAGATAAATAGGCCATTGTTTGGTGCATTTGCAGTCTTTCTTCTTTTTCTTTCATGTTGGGTTAGCTGGTTTTC
TTTAAATGGATACTGGGATTTTTTTAAATTAAGTGATGTTATTATCTTCTCATGGAAAGTTGGAGTGATGATATTTGGTG
CTCCTGTATTGTTTTATTTTTCATATCTTGCATTTTATTGTGCAATAAAAAACAAACCTGCAAAGGTGAATAATAAACTG
GCTAATACATTCGCTATGTTAGCCATGCTGGGTGTTGTGATTAGTTTTTTTTATCTGTATATATCGGTTATAGCCTCACC
GAATATGGTTATAAGCTATGCTCAAGATCATCTTGGATGTCCCCTAATGAATACGTAA

Upstream 100 bases:

>100_bases
ACGAATATAGAATAAGCGAAAAAAAAAATAAAAACACATAGAGTACACAATATTCCTTATCATCCAGACCAATTATTTAG
CGCTTGGGGGAGGTTCAGTC

Downstream 100 bases:

>100_bases
AAGATATAAAGCTATGTCCATAGTTAACCGCCTCTTACTTCTCCCAAAAATAATTTTGGTAAACAAGCCAATTGAAGAAT
ATAAATATGTTCAAGCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYFSYLAFYCAIKNKPAKVNNKL
ANTFAMLAMLGVVISFFYLYISVIASPNMVISYAQDHLGCPLMNT

Sequences:

>Translated_125_residues
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYFSYLAFYCAIKNKPAKVNNKL
ANTFAMLAMLGVVISFFYLYISVIASPNMVISYAQDHLGCPLMNT
>Mature_125_residues
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYFSYLAFYCAIKNKPAKVNNKL
ANTFAMLAMLGVVISFFYLYISVIASPNMVISYAQDHLGCPLMNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14261; Mature: 14261

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYF
CCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHEEHHHHHHHHHHHHHHHHH
SYLAFYCAIKNKPAKVNNKLANTFAMLAMLGVVISFFYLYISVIASPNMVISYAQDHLGC
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCC
PLMNT
CCCCC
>Mature Secondary Structure
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYF
CCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHEEHHHHHHHHHHHHHHHHH
SYLAFYCAIKNKPAKVNNKLANTFAMLAMLGVVISFFYLYISVIASPNMVISYAQDHLGC
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCC
PLMNT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA