Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025278

Identifier: 170025278

GI number: 170025278

Start: 3364145

End: 3364987

Strand: Direct

Name: 170025278

Synonym: YPK_3057

Alternate gene names: NA

Gene position: 3364145-3364987 (Clockwise)

Preceding gene: 170025277

Following gene: 170025279

Centisome position: 71.74

GC content: 34.76

Gene sequence:

>843_bases
ATGAAGTATGACTCAGTGTTAAAAACTTTTGTTGATGATAATTATCGATTAGAAGATCATCTTGATTTTAAAAAGCAACA
TGCAGATATCAGATATCAAAAACTACATAAACAACTCAATGAAATGAGTGATGAAAATATGCATGCATTATTAACAATAG
AGGAAGGGGAGTATTTTTTAAAAACATTATGTAATCCCAACCCTCACCAATCGTGGAAGGATGCTATTTTTTCCTGTACC
GATCCCACATCGGTTTTTTTTGGAAGTCTCGTTGAGTCATTGTCTGTGAGTAGAATAGTCTTTGAAATAAGGGGGTTTGG
TGTAACTGCAACTGAATATGTGGGGAAAAATGGCAGTTCATATATTAAATTATCTGGATATGCTGGAATAAGAAAGTATT
TAGATGCAACAAGATACTTAATTGATAACCCAAAAATATTAGATATAGGCATAGGAACTCAAGGTATTGAAAATGGGATC
GTTAGAGGCGCAAGATTCTGCATTGTATTTTCTGCTGCTTATCGTTCCGTTGAATTGTTGTTGAAAGATGAATATGGGTT
AGCTGATTTTTTTGTTAATTTAACTCTTGATGCTGCAAAACTAGGAGTATCTATTGGGGTTGCTTGGGGGGCAAAGGCGT
TAGCTACCGGTTTTATGGTCGCCGGAGGTAGTGTTCTTGCTATTGCTATTGGCATTTTTACCATCGGAGTTCTCGCAAGC
TTAATTTTATACTGGTTAGATAACGAATATAAAATAAGTGAAACAATAATAAAAAATATAAAATCGCATAGAGTACAAAA
TTCACCGTATCATGCTGATCAATTCTTTAACGCTTGGGGGTGA

Upstream 100 bases:

>100_bases
AGCAGATTTTAGCTTTTTGACAGAAAATTATGGGATTCTGGTGCACAACTCCCTATAATGCGTTGACTTAACTTAAATTA
TATACAGGGAGTTAATAATT

Downstream 100 bases:

>100_bases
CTCAGCCGTGGTTAAAATAAACAGGCCATTAGTTGGTGCATTTGCAATCTTGCTTTTCTTTCTTTCATCTTGGGGGTGCT
GGTTTTCTTTAAGTGGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT
DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI
VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIGIFTIGVLAS
LILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWG

Sequences:

>Translated_280_residues
MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT
DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI
VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIGIFTIGVLAS
LILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWG
>Mature_280_residues
MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT
DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI
VRGARFCIVFSAAYRSVELLLKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIGIFTIGVLAS
LILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31296; Mature: 31296

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL
CCHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHH
KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS
HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL
EEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEEHHHHHHHHHE
LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIGIFTIGVLAS
EECCCCHHHHHEEEEEHHHHHHHHEEHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWG
HHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKYDSVLKTFVDDNYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL
CCHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHH
KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS
HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL
EEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEEHHHHHHHHHE
LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIGIFTIGVLAS
EECCCCHHHHHEEEEEHHHHHHHHEEHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LILYWLDNEYKISETIIKNIKSHRVQNSPYHADQFFNAWG
HHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA