| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 170025213
GI number: 170025213
Start: 3285348
End: 3285794
Strand: Direct
Name: fur [H]
Synonym: YPK_2991
Alternate gene names: 170025213
Gene position: 3285348-3285794 (Clockwise)
Preceding gene: 170025212
Following gene: 170025219
Centisome position: 70.06
GC content: 42.73
Gene sequence:
>447_bases ATGACTGACAACAACAAAGCCTTAAAAAACGCTGGCCTTAAAGTCACACTCCCCCGGCTTAAAATTCTGGAAGTGTTGCA AAATCCTGCGTGTCACCACGTCAGCGCGGAAGATCTTTATAAAAAACTGATCGATATTGGTGAAGAGATTGGCTTAGCAA CGGTTTACCGTGTTCTGAACCAATTTGATGATGCTGGTATTGTTACCCGCCACAATTTCGAAGGGGGTAAATCAGTTTTT GAGCTGACTCAACAACATCACCACGATCACCTAATTTGCCTGGATTGCGGCAAAGTGATCGAGTTTAGCAACGAATCCAT TGAATCACTTCAACGTGAAATTGCTAAACAACATGGCATCAAGCTGACTAATCATAGCCTGTATTTATACGGTCACTGTG AAACCGGCAATTGCCGTGAAGATGAGTCTGCACACAGTAAAAGATAA
Upstream 100 bases:
>100_bases CTAGCAGCTCTATAATAAGACGCAATTATGATTATTGCGCCACGGATGTCATAGGCTAAACAGCCTTAATTTGAATCGAT TGTAACAGGACTGAATCCGC
Downstream 100 bases:
>100_bases TATCGTTTTATCGCATTACTCTTATAAAGATTTTAAGCACTGCTAGGTTTACTGTTTATGTTTGATAAGGCCATGTCACT AGAGCGTTACACATCAGGCT
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTDNNKALKNAGLKVTLPRLKILEVLQNPACHHVSAEDLYKKLIDIGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSNESIESLQREIAKQHGIKLTNHSLYLYGHCETGNCREDESAHSKR
Sequences:
>Translated_148_residues MTDNNKALKNAGLKVTLPRLKILEVLQNPACHHVSAEDLYKKLIDIGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSNESIESLQREIAKQHGIKLTNHSLYLYGHCETGNCREDESAHSKR >Mature_147_residues TDNNKALKNAGLKVTLPRLKILEVLQNPACHHVSAEDLYKKLIDIGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFE LTQQHHHDHLICLDCGKVIEFSNESIESLQREIAKQHGIKLTNHSLYLYGHCETGNCREDESAHSKR
Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=148, Percent_Identity=85.8108108108108, Blast_Score=265, Evalue=1e-72,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16743; Mature: 16612
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNNKALKNAGLKVTLPRLKILEVLQNPACHHVSAEDLYKKLIDIGEEIGLATVYRVLN CCCCCHHHHHCCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSNESIESLQREIAKQHGI HCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHCC KLTNHSLYLYGHCETGNCREDESAHSKR EEECCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TDNNKALKNAGLKVTLPRLKILEVLQNPACHHVSAEDLYKKLIDIGEEIGLATVYRVLN CCCCHHHHHCCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSNESIESLQREIAKQHGI HCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHCC KLTNHSLYLYGHCETGNCREDESAHSKR EEECCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1406286; 11586360; 12142430 [H]