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The map label for this gene is recN [H]

Identifier: 170025198

GI number: 170025198

Start: 3276201

End: 3277862

Strand: Direct

Name: recN [H]

Synonym: YPK_2976

Alternate gene names: 170025198

Gene position: 3276201-3277862 (Clockwise)

Preceding gene: 170025197

Following gene: 170025199

Centisome position: 69.86

GC content: 46.21

Gene sequence:

>1662_bases
ATGCTGGTCCAATTAACCATCAGCAACTTTGCTATTGTGCGTGAGTTAGAAATTGATTTTCAGCCCGGAATGACGGCAAT
CACTGGCGAAACCGGGGCGGGCAAATCCATTGCCGTAGATGCACTAGGGTTATGCCTCGGGAATCGCTCAGATGGCAGCA
TGGTGCGCTTAGGGGCAACACGCGCTGACATTTGCGCCCGCTTCTCACTGGCGGATACACCATCTGCCCGCCAATGGCTG
GAAAACAACCATCTCGATGACAATAATGAATGCCTGTTGCGGCGCGCTATTGGCGCTGATGGCCGTTCAAGAGGCTTTAT
TAATGGTACGCCTGTACCCGTATCCCAATTAAGAGAGTTGGGCCAACATCTAATTCAGATCCACGGCCAACACGCTCATC
AACTGCTGCTCAAACCCGATCATCAAAAACAATTATTGGATGCCTACGCAAATCAATCATCTCTGTTGGCAGAAATGAAG
GCAGCCTATCAAATTTGGCATCAAAGTTGCCGTGATCTGGCACTTCACCAACAACAGTCGCTGGAACGAACTGCCCGCCA
AGAGTTATTACAATATCAACTAAAAGAATTGAATTCATTTTCTCCACAGGCAGGGGAATATGAACAAATTGATATTGAAT
ACAAACGTTTGGCAAATAGCGGGCAATTACTGTCCCTGAGTCAGCAGACTTTACAATTACTGTCAGATGATGAACAAAAC
AATATCCTCAGCCAGCTTTACGCTGCCAAACATCAGTTGACCGAGCTGGCCAGTATGGACGAACAATTTAATAATCTACT
GAATATGTTAGAAGAAGCCTCAATCCAAATCAGTGAAGCCAGTGATGAGTTACGTCACTATGCGGAACAATTAGATATGG
ATCCAAATCGTCTATATGAGCTAGAAAAACGGTTATCTCGGCAATTAAATCTCGCGCGGAAACACCATGTAGCACCGGAA
GAATTGCCACAATTTCATCAGCAATTACTGGATGAACAAGAACTGCTCTCACAACAAGAAAATGATCACGAACAACTTAG
TAATGCAGTAAATACTCACTATCAGCAAGCACTGGCAATAGCAAAACGGCTACACCAAGAGCGTCAATATTATGCCAATG
AACTGGCTGCACTGATTACTGAAAGCATGCATGAGCTATCGATGCCACATGGCAAGTTCGCCATTGAAACAATATTTGAG
CCAGAACATCTTAGTGCGGAAGGGGCAACCCGAATTGAGTTCTGTGTCACCACCAATCCAGGCCAACCCCTACAAGCACT
GGTCAAAGTTGCATCTGGTGGTGAGCTGTCTCGCATCGCCTTGGCTATTCAGGTAATTACAGCACGTAAAATGGACACCC
CAGCATTAATCTTTGATGAGGTAGATGTAGGTATCAGCGGCCCAACGGCGGCCATAGTTGGCCGCCTGCTACGTCAACTT
GGCGAATCAACTCAAGTCATGTGCGTAACCCACCTTCCGCAAGTTGCCGGCTGTGGTCATCAACATTTCTTTGTGAGTAA
ACAAACCGATGGTACTGAGACTGAAACTCATATGCATCGGTTAGATAAAAAAGCCCGCTTACAAGAGTTGGCGCGTCTTC
TGGGCGGTAGTGAGGTGACAAAAAACACCTTGGCAAACGCAAAAGAATTGCTTGCTGCATAG

Upstream 100 bases:

>100_bases
AAAAATTATTCTAAAAATCACCTCAGCTACTTTACTGTATATAAAACCAGTCTATACTGTATTCAAATACAGACATGTGT
TTATGTACAGGGGGTTTACC

Downstream 100 bases:

>100_bases
AAAAGATTAACTTTTTTCCTTTTTGGTGGTCATACAGGTGCCCTGTAAAGGTTTCCAACTGCCGCAAGGTCTATTATCAT
CGTCATCCTATGCCCTAAAG

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGLCLGNRSDGSMVRLGATRADICARFSLADTPSARQWL
ENNHLDDNNECLLRRAIGADGRSRGFINGTPVPVSQLRELGQHLIQIHGQHAHQLLLKPDHQKQLLDAYANQSSLLAEMK
AAYQIWHQSCRDLALHQQQSLERTARQELLQYQLKELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQN
NILSQLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMDPNRLYELEKRLSRQLNLARKHHVAPE
ELPQFHQQLLDEQELLSQQENDHEQLSNAVNTHYQQALAIAKRLHQERQYYANELAALITESMHELSMPHGKFAIETIFE
PEHLSAEGATRIEFCVTTNPGQPLQALVKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVTKNTLANAKELLAA

Sequences:

>Translated_553_residues
MLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGLCLGNRSDGSMVRLGATRADICARFSLADTPSARQWL
ENNHLDDNNECLLRRAIGADGRSRGFINGTPVPVSQLRELGQHLIQIHGQHAHQLLLKPDHQKQLLDAYANQSSLLAEMK
AAYQIWHQSCRDLALHQQQSLERTARQELLQYQLKELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQN
NILSQLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMDPNRLYELEKRLSRQLNLARKHHVAPE
ELPQFHQQLLDEQELLSQQENDHEQLSNAVNTHYQQALAIAKRLHQERQYYANELAALITESMHELSMPHGKFAIETIFE
PEHLSAEGATRIEFCVTTNPGQPLQALVKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVTKNTLANAKELLAA
>Mature_553_residues
MLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGLCLGNRSDGSMVRLGATRADICARFSLADTPSARQWL
ENNHLDDNNECLLRRAIGADGRSRGFINGTPVPVSQLRELGQHLIQIHGQHAHQLLLKPDHQKQLLDAYANQSSLLAEMK
AAYQIWHQSCRDLALHQQQSLERTARQELLQYQLKELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQN
NILSQLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMDPNRLYELEKRLSRQLNLARKHHVAPE
ELPQFHQQLLDEQELLSQQENDHEQLSNAVNTHYQQALAIAKRLHQERQYYANELAALITESMHELSMPHGKFAIETIFE
PEHLSAEGATRIEFCVTTNPGQPLQALVKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVTKNTLANAKELLAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=74.3218806509946, Blast_Score=850, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61828; Mature: 61828

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGLCLGNRSDGSMVRLGAT
CEEEEEECCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCC
RADICARFSLADTPSARQWLENNHLDDNNECLLRRAIGADGRSRGFINGTPVPVSQLREL
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
GQHLIQIHGQHAHQLLLKPDHQKQLLDAYANQSSLLAEMKAAYQIWHQSCRDLALHQQQS
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERTARQELLQYQLKELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHCCCCCEEHHHHHHHHHHCCCHHH
NILSQLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMDPNRLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHCCCCHHHHHH
LEKRLSRQLNLARKHHVAPEELPQFHQQLLDEQELLSQQENDHEQLSNAVNTHYQQALAI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AKRLHQERQYYANELAALITESMHELSMPHGKFAIETIFEPEHLSAEGATRIEFCVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEECCC
GQPLQALVKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KNTLANAKELLAA
HHHHHHHHHHHCC
>Mature Secondary Structure
MLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGLCLGNRSDGSMVRLGAT
CEEEEEECCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCC
RADICARFSLADTPSARQWLENNHLDDNNECLLRRAIGADGRSRGFINGTPVPVSQLREL
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
GQHLIQIHGQHAHQLLLKPDHQKQLLDAYANQSSLLAEMKAAYQIWHQSCRDLALHQQQS
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERTARQELLQYQLKELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHCCCCCEEHHHHHHHHHHCCCHHH
NILSQLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMDPNRLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHCCCCHHHHHH
LEKRLSRQLNLARKHHVAPEELPQFHQQLLDEQELLSQQENDHEQLSNAVNTHYQQALAI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AKRLHQERQYYANELAALITESMHELSMPHGKFAIETIFEPEHLSAEGATRIEFCVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEECCC
GQPLQALVKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KNTLANAKELLAA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]