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The map label for this gene is yajD [H]

Identifier: 170025105

GI number: 170025105

Start: 3179243

End: 3179584

Strand: Direct

Name: yajD [H]

Synonym: YPK_2881

Alternate gene names: 170025105

Gene position: 3179243-3179584 (Clockwise)

Preceding gene: 170025090

Following gene: 170025106

Centisome position: 67.8

GC content: 42.69

Gene sequence:

>342_bases
ATGGCATATATACCAAAGAATTATTCCCGATTGGAAAGCGGTTATCGGGAGAAGGCACTGAAAATTTTCCCCTGGGTTTG
TGGTAAATGCTCACGGGAGTTTGTCTATTCCAATCTGCGAGAGCTAACGGTTCATCATATTGATCATGACCACGGTAATA
ACCCAGAAGATGGCAGCAACTGGGAGATGTTATGCCTGTTTTGTCACGATCATGAGCATTCCAAATATACAGAGGTGGAT
TTATACGGCTCAACCGTGGTTGCCGGAGATGATGCACAAAAGGATCAAGGCGTCGCCACCCATAACCCATTTGCTAATTT
GAAATCTTTAATGAAAAAATAA

Upstream 100 bases:

>100_bases
GCGTGTTGGCGTTTGAGTATTTATCCTCAATAGTCGATAGTCCGACGCCCACTTTCGCGCTAAAATAAGCAGCATATTTT
TCGCAGAATTGAAGGCTCAT

Downstream 100 bases:

>100_bases
TCTGTGCGGCTCGTCTTTCTGACGGCTAAAAACCCAATAGTTGCCGATATGAACGAGGTTCTTGTTGATCAACCTGTAAC
CCGAACGTATTGGCAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKYTEVD
LYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK

Sequences:

>Translated_113_residues
MAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKYTEVD
LYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
>Mature_112_residues
AYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKYTEVDL
YGSTVVAGDDAQKDQGVATHNPFANLKSLMKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=113, Percent_Identity=82.3008849557522, Blast_Score=209, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13016; Mature: 12884

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WEMLCLFCHDHEHSKYTEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
EEEEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WEMLCLFCHDHEHSKYTEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
EEEEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]