Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 170025062

GI number: 170025062

Start: 3124035

End: 3124643

Strand: Direct

Name: acrR [C]

Synonym: YPK_2838

Alternate gene names: 170025062

Gene position: 3124035-3124643 (Clockwise)

Preceding gene: 170025060

Following gene: 170025065

Centisome position: 66.62

GC content: 42.36

Gene sequence:

>609_bases
ATGTCTTTTGAAATTGATATTTCTACTATTGCAACTTTACCCGCCCAGCAGAGGATCCTCTTAACAGCCCATCGTCTATT
TTATCAAGAAGGGATCCGTGCCACTGGTATTGACAAAATAATTAAAGAATCGGGTGTCACTAAAGTCACTTTTTATCGAC
ATTTTCCCAGTAAAAATGATTTGATTAGCGCGTTTCTTGAATATCGGCATCAACGGTGGATTAACTGGTTTATCGAAGAA
CTTAAACAGCAAACCCTGCATCACGCAAATTTAGCCTTGGCATTAACGAAATGCATGGCAAGCTGGTTTGAGCACCCGAG
TTTTCGCGGTTGCGCTTTTATCAATACCACAGTAGAACTGGGTGGGTTATTGCCGGAAATACGCGAACGTGCTTATCAGC
ATAAAAAGCAAATGGCGCAAGAGATAAGCCGATATTTACCACAAGATGATCAATGTGAGATCCGCAGTGAAATCATCACG
ATGGTGTTAGATGGTGCGATCGTAAAAGCCCAGAGAGAATTAGATTTTTCGGCAGCCTTAACACTAATACACAGTACATT
GCAGGCCTTAGAGCCGCAGTGGATCACAATAAGAAACGCGGCCGAATGA

Upstream 100 bases:

>100_bases
AATAAATCTAGCCGATGTAGACAGATTTGTCTACACTCTTTGTGCACTTCTTATCAGCGCCAGATGATTACCAGAATCAG
ATGACTACCGGAGCCAGATG

Downstream 100 bases:

>100_bases
CCGCGTTTCTCTCAGGACTCACGCCTATAATCAGAATTAGAACTGATAGACCATACCTACTGCGACAATATCATCAGTAT
TTATGCGGGCATTTTTGGTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR/AcrR-Family; Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSFEIDISTIATLPAQQRILLTAHRLFYQEGIRATGIDKIIKESGVTKVTFYRHFPSKNDLISAFLEYRHQRWINWFIEE
LKQQTLHHANLALALTKCMASWFEHPSFRGCAFINTTVELGGLLPEIRERAYQHKKQMAQEISRYLPQDDQCEIRSEIIT
MVLDGAIVKAQRELDFSAALTLIHSTLQALEPQWITIRNAAE

Sequences:

>Translated_202_residues
MSFEIDISTIATLPAQQRILLTAHRLFYQEGIRATGIDKIIKESGVTKVTFYRHFPSKNDLISAFLEYRHQRWINWFIEE
LKQQTLHHANLALALTKCMASWFEHPSFRGCAFINTTVELGGLLPEIRERAYQHKKQMAQEISRYLPQDDQCEIRSEIIT
MVLDGAIVKAQRELDFSAALTLIHSTLQALEPQWITIRNAAE
>Mature_201_residues
SFEIDISTIATLPAQQRILLTAHRLFYQEGIRATGIDKIIKESGVTKVTFYRHFPSKNDLISAFLEYRHQRWINWFIEEL
KQQTLHHANLALALTKCMASWFEHPSFRGCAFINTTVELGGLLPEIRERAYQHKKQMAQEISRYLPQDDQCEIRSEIITM
VLDGAIVKAQRELDFSAALTLIHSTLQALEPQWITIRNAAE

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23356; Mature: 23225

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEIDISTIATLPAQQRILLTAHRLFYQEGIRATGIDKIIKESGVTKVTFYRHFPSKND
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCHH
LISAFLEYRHQRWINWFIEELKQQTLHHANLALALTKCMASWFEHPSFRGCAFINTTVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
GGLLPEIRERAYQHKKQMAQEISRYLPQDDQCEIRSEIITMVLDGAIVKAQRELDFSAAL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIHSTLQALEPQWITIRNAAE
HHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure 
SFEIDISTIATLPAQQRILLTAHRLFYQEGIRATGIDKIIKESGVTKVTFYRHFPSKND
CEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCHH
LISAFLEYRHQRWINWFIEELKQQTLHHANLALALTKCMASWFEHPSFRGCAFINTTVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
GGLLPEIRERAYQHKKQMAQEISRYLPQDDQCEIRSEIITMVLDGAIVKAQRELDFSAAL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIHSTLQALEPQWITIRNAAE
HHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA