| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025006
Identifier: 170025006
GI number: 170025006
Start: 3069589
End: 3069915
Strand: Reverse
Name: 170025006
Synonym: YPK_2781
Alternate gene names: NA
Gene position: 3069915-3069589 (Counterclockwise)
Preceding gene: 170025015
Following gene: 170025005
Centisome position: 65.46
GC content: 45.87
Gene sequence:
>327_bases ATGAGCAACTACCGTGCACTGAGTATCGTTGTAATCATGTTTTCATGGATAATATCTTTCTCTGCCAGTAGTACGCAATC CACCCTTTCTGTCACCGGTACAATTACTTTTTCTGGGGCCATTGTTGATACCCCTTGTGATACGTCGGTATTAAACCAGA CCATTACAACGAGCTGTTATCGTAATGGTAAAATGATAACCAGCAGACAAACACTCACACGTAATATGCCTCTGAACGCG CGGTTGCCAGGGAGTTTAGCCACGTCCCGTTTGGAATGGCTGAATCAGCAGCGCAGCCTCGGAGTCCTAACTGTTACCTA CCTCTAA
Upstream 100 bases:
>100_bases TTATAAATAGAATAGAGTAATAAAAAACACTCTATTACGCCCATTGTACTGCTTGAAATCCTCTATCTTTAAGATGACAG CTATAAAAGTTGAGGTGATC
Downstream 100 bases:
>100_bases TATTTCTCAACATGTTCGGGCATCACGGTTTATCGACGTGATAAACCGTGATTTATCACCTGAAGTTGTTTGACCACATG ATATACTCGACGCCATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSNYRALSIVVIMFSWIISFSASSTQSTLSVTGTITFSGAIVDTPCDTSVLNQTITTSCYRNGKMITSRQTLTRNMPLNA RLPGSLATSRLEWLNQQRSLGVLTVTYL
Sequences:
>Translated_108_residues MSNYRALSIVVIMFSWIISFSASSTQSTLSVTGTITFSGAIVDTPCDTSVLNQTITTSCYRNGKMITSRQTLTRNMPLNA RLPGSLATSRLEWLNQQRSLGVLTVTYL >Mature_107_residues SNYRALSIVVIMFSWIISFSASSTQSTLSVTGTITFSGAIVDTPCDTSVLNQTITTSCYRNGKMITSRQTLTRNMPLNAR LPGSLATSRLEWLNQQRSLGVLTVTYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11859; Mature: 11728
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYRALSIVVIMFSWIISFSASSTQSTLSVTGTITFSGAIVDTPCDTSVLNQTITTSCY CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHH RNGKMITSRQTLTRNMPLNARLPGSLATSRLEWLNQQRSLGVLTVTYL CCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure SNYRALSIVVIMFSWIISFSASSTQSTLSVTGTITFSGAIVDTPCDTSVLNQTITTSCY CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHH RNGKMITSRQTLTRNMPLNARLPGSLATSRLEWLNQQRSLGVLTVTYL CCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA