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The map label for this gene is psaE

Identifier: 170024986

GI number: 170024986

Start: 3045935

End: 3046579

Strand: Reverse

Name: psaE

Synonym: YPK_2761

Alternate gene names: 170024986

Gene position: 3046579-3045935 (Counterclockwise)

Preceding gene: 170024987

Following gene: 170024985

Centisome position: 64.97

GC content: 37.67

Gene sequence:

>645_bases
ATGAGTCACTGTGTTGTTTTAAATAAATTAGAAAGTGTGTTAATAATTGGTGACAGTAGATATGCTTTATCCAAGAATGA
GGTGCTGCTGTTAGAGTGTCTTTATTTACGTGCCGGTGATGTGATCTCCCATGATGAATTACTGACAACCTGTTGGCCTG
ATCGAGTCGTCTCCCCAACATCACTGCCGGTTGCTATTAAACATATCCGTGATGTATTCCGTAAAATAACCCGGAGTGAG
GTGATAAAGACATATAAGAATGAGGGCTATAGCTATCAAAAGGATAGTGTACTAATTATTATTGATGATGGCAGCACCGA
AAAAGAGAGTCATAGCGCAGCATATACCAGAAAGGAAAAACCCGACATACCAATAAAATTGGTTGGATTACAAATACTTT
CTCACCTGAACTCAACCTTTTTTATCGCTATTATGATGGTCATCATCATCATATTTTTCATGGTAGGAGGTAATGATATT
GTCTCATTTATTGATAGTGATACCAACAGTGTCATTATAACGAATGTGACAACCAAGATGAATGGCCCAACGGCAGGCTT
ACCGAAGGTGAAGAATAGTATGATATTTAAGGATGATTTTGGTTTAGTCATTATCTGTGATCAATCGGAATGCAAACAGC
AATGA

Upstream 100 bases:

>100_bases
TGTTTAGCTTTTGTGTATAAAATTTTTCCAATTAAGACTCACTTATGGCTATTGAGCCGTCCTAATATTCTGAATTCCAG
ATCAGGGGAGGTGAGGGCAA

Downstream 100 bases:

>100_bases
AAGCAAAATCACTTACTCTCATATCTATAACAGTAATGTTTTTCTTATTTTTAATCTATAGCTTTAATGACTTATTTTTT
TATTCTGAAGTGAAATATGG

Product: transcriptional regulator CadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTTCWPDRVVSPTSLPVAIKHIRDVFRKITRSE
VIKTYKNEGYSYQKDSVLIIIDDGSTEKESHSAAYTRKEKPDIPIKLVGLQILSHLNSTFFIAIMMVIIIIFFMVGGNDI
VSFIDSDTNSVIITNVTTKMNGPTAGLPKVKNSMIFKDDFGLVIICDQSECKQQ

Sequences:

>Translated_214_residues
MSHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTTCWPDRVVSPTSLPVAIKHIRDVFRKITRSE
VIKTYKNEGYSYQKDSVLIIIDDGSTEKESHSAAYTRKEKPDIPIKLVGLQILSHLNSTFFIAIMMVIIIIFFMVGGNDI
VSFIDSDTNSVIITNVTTKMNGPTAGLPKVKNSMIFKDDFGLVIICDQSECKQQ
>Mature_213_residues
SHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTTCWPDRVVSPTSLPVAIKHIRDVFRKITRSEV
IKTYKNEGYSYQKDSVLIIIDDGSTEKESHSAAYTRKEKPDIPIKLVGLQILSHLNSTFFIAIMMVIIIIFFMVGGNDIV
SFIDSDTNSVIITNVTTKMNGPTAGLPKVKNSMIFKDDFGLVIICDQSECKQQ

Specific function: Required for expression of pH 6 antigen

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAE_YERPE (P68588)

Other databases:

- EMBL:   M86713
- EMBL:   X97759
- EMBL:   EF079883
- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AH0158
- PIR:   S32925
- RefSeq:   NP_670184.1
- RefSeq:   NP_992657.1
- RefSeq:   YP_002346326.1
- ProteinModelPortal:   P68588
- SMR:   P68588
- GeneID:   1147831
- GeneID:   1174143
- GeneID:   2766548
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1301
- KEGG:   ypk:y2884
- KEGG:   ypm:YP_1291
- HOGENOM:   HBG757353
- OMA:   INNEAHA
- ProtClustDB:   CLSK888801
- BioCyc:   YPES187410:Y2884-MONOMER
- BioCyc:   YPES214092:YPO1301-MONOMER
- GO:   GO:0005622
- GO:   GO:0006350
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00862

Pfam domain/function: PF00486 Trans_reg_C; SSF46894 Bipartite_resp_reg_C-effector

EC number: NA

Molecular weight: Translated: 23958; Mature: 23827

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTTCWPDRVVSPT
CCCEEEEECCCEEEEECCCCEEECCCCEEEEEEEHHHCCCCCCCCHHHHHCCCCCCCCCC
SLPVAIKHIRDVFRKITRSEVIKTYKNEGYSYQKDSVLIIIDDGSTEKESHSAAYTRKEK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCC
PDIPIKLVGLQILSHLNSTFFIAIMMVIIIIFFMVGGNDIVSFIDSDTNSVIITNVTTKM
CCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCEEEEEEEEEC
NGPTAGLPKVKNSMIFKDDFGLVIICDQSECKQQ
CCCCCCCCCCCCCEEEECCCCEEEEECCHHHCCC
>Mature Secondary Structure 
SHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTTCWPDRVVSPT
CCEEEEECCCEEEEECCCCEEECCCCEEEEEEEHHHCCCCCCCCHHHHHCCCCCCCCCC
SLPVAIKHIRDVFRKITRSEVIKTYKNEGYSYQKDSVLIIIDDGSTEKESHSAAYTRKEK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCC
PDIPIKLVGLQILSHLNSTFFIAIMMVIIIIFFMVGGNDIVSFIDSDTNSVIITNVTTKM
CCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCEEEEEEEEEC
NGPTAGLPKVKNSMIFKDDFGLVIICDQSECKQQ
CCCCCCCCCCCCCEEEECCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8100346; 11586360; 12142430