Click here to switch to the map view.

The map label for this gene is mukF [H]

Identifier: 170024882

GI number: 170024882

Start: 2922589

End: 2923911

Strand: Reverse

Name: mukF [H]

Synonym: YPK_2657

Alternate gene names: 170024882

Gene position: 2923911-2922589 (Counterclockwise)

Preceding gene: 170024883

Following gene: 170024881

Centisome position: 62.35

GC content: 49.74

Gene sequence:

>1323_bases
ATGAGTGAATTTTCCCAGACAGTACCCGAACTGGTCGCCTGGGCGCGAAAGAATGATTTTTCGATTACTCTGCCCACGGA
ACGTCTGGCTTTTCTTATGGCTATCGCCGCGTTAAACGGCGAGCGGTTAGACGGTGAAATGAGCGAAGGCGAGTTGGTTG
ATGCATTTCGTCACGTCAGTAAAGGTTTTGAGCAGACGACGGAAACCGTCACGGTACGTGCCAATAACGCGATCAATGAC
ATGGTACGCCAGCGCTTATTAAACCGTTTTACCAGCGAGCTGGCTGATGGTAATGCCATTTACCGCTTGACCCCTTTGGG
CATTGGCATTACCGATTATTATATTCGCCAGCGTGAGTTTTCTACCCTGCGTCTCTCCATGCAGTTATCGATTGTGGCGC
AAGAGCTGCAACGTGCGGCTGAAGCAGCAGAAGAGGGGGGAGATGAGTTTCACTGGCATCGTAACGTCTTTGCCCCGCTA
AAATATTCCGTCGCTGAAATCTTTGACAGCATTGATATGACTCAGCGTTTGATGGATGAACAGCAACATAGCGTGAAAGA
AGATATCGCGGCGTTGCTGAATCAAGACTGGCGTGCAGCCATTGCCAGTTGTGAAATGTTGTTGTCAGAAACCTCCGGCA
CACTCCGTGAGTTGCAAGATACACTGGAAGCCGCGGGTGATAAGCTTCAGGCAAATTTATTGCGTATTCAAGAAGCGACT
ATCGGCAATGCAGGCTTAGATCTGGTTGATAAGCTGGTGTTTGATTTACAAAGTAAACTTGACCGCATTATCAGTTGGGG
CCAACAGGCCATCGATCTATGGATCGGTTATGACCGTCACGTGCATAAGTTTATTCGTACTGCCATTGATATGGATAAAA
ACCGGGTCTTCGCCCAACGGTTACGCCAATCGGTACAACACTATTTTGATAACCCGTGGACACTCACTCACGCCAACGCA
GACCGCTTACTGGATATGCGCGATGAAGAGCTGGCGCTACGCAGTGAAGAAGTCACGGGCGAGCTGCCTCCGGATCTGGA
ATTTGAAGAGTTTAATGCCATCCGTGAGCAGTTAACCGCCATGATTGAGCAGGCGTTGCTGGTTTATCAGCAACAGCAAA
TACCGCTTAATCTGGGGGAAGTTATGCGTGATTACCTCGCGCAATATCCGCGTGCTCGTCATTTTGACGTGGCTCGTATC
CTGGTCGACCAGGCTGTTCGCCTCGGTGTGGCCGAAGCCGATTTCTCAGGGTTGCCAGCCGAATGGTTAGCAATCAATGA
TTACGGAGCCAAGGTGCAGGCACATGTCATCAACAAATATTGA

Upstream 100 bases:

>100_bases
TATTAGCGTTGGAACAGCGCTATTGCCGGCAAGAGCCCTTTATTAGTTTGGGGCGCTACGTGCATGTTATGGCGTTTAAG
CCGAATCTGAAGGACCCATT

Downstream 100 bases:

>100_bases
AGTAGTAATGCCCGTTAAGCTGGCTCAGGCATTAGCCAACACATTATTTCCGGCATTAGACAGCCAGTTACGTGCTGGCC
GTCATATTGGTATTGATGAG

Product: condesin subunit F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSEFSQTVPELVAWARKNDFSITLPTERLAFLMAIAALNGERLDGEMSEGELVDAFRHVSKGFEQTTETVTVRANNAIND
MVRQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREFSTLRLSMQLSIVAQELQRAAEAAEEGGDEFHWHRNVFAPL
KYSVAEIFDSIDMTQRLMDEQQHSVKEDIAALLNQDWRAAIASCEMLLSETSGTLRELQDTLEAAGDKLQANLLRIQEAT
IGNAGLDLVDKLVFDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQRLRQSVQHYFDNPWTLTHANA
DRLLDMRDEELALRSEEVTGELPPDLEFEEFNAIREQLTAMIEQALLVYQQQQIPLNLGEVMRDYLAQYPRARHFDVARI
LVDQAVRLGVAEADFSGLPAEWLAINDYGAKVQAHVINKY

Sequences:

>Translated_440_residues
MSEFSQTVPELVAWARKNDFSITLPTERLAFLMAIAALNGERLDGEMSEGELVDAFRHVSKGFEQTTETVTVRANNAIND
MVRQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREFSTLRLSMQLSIVAQELQRAAEAAEEGGDEFHWHRNVFAPL
KYSVAEIFDSIDMTQRLMDEQQHSVKEDIAALLNQDWRAAIASCEMLLSETSGTLRELQDTLEAAGDKLQANLLRIQEAT
IGNAGLDLVDKLVFDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQRLRQSVQHYFDNPWTLTHANA
DRLLDMRDEELALRSEEVTGELPPDLEFEEFNAIREQLTAMIEQALLVYQQQQIPLNLGEVMRDYLAQYPRARHFDVARI
LVDQAVRLGVAEADFSGLPAEWLAINDYGAKVQAHVINKY
>Mature_439_residues
SEFSQTVPELVAWARKNDFSITLPTERLAFLMAIAALNGERLDGEMSEGELVDAFRHVSKGFEQTTETVTVRANNAINDM
VRQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREFSTLRLSMQLSIVAQELQRAAEAAEEGGDEFHWHRNVFAPLK
YSVAEIFDSIDMTQRLMDEQQHSVKEDIAALLNQDWRAAIASCEMLLSETSGTLRELQDTLEAAGDKLQANLLRIQEATI
GNAGLDLVDKLVFDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQRLRQSVQHYFDNPWTLTHANAD
RLLDMRDEELALRSEEVTGELPPDLEFEEFNAIREQLTAMIEQALLVYQQQQIPLNLGEVMRDYLAQYPRARHFDVARIL
VDQAVRLGVAEADFSGLPAEWLAINDYGAKVQAHVINKY

Specific function: Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid

COG id: COG3006

COG function: function code D; Uncharacterized protein involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Restricted to the nucleoid region (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mukF family [H]

Homologues:

Organism=Escherichia coli, GI1787152, Length=440, Percent_Identity=84.7727272727273, Blast_Score=780, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005582 [H]

Pfam domain/function: PF03882 KicB [H]

EC number: NA

Molecular weight: Translated: 50231; Mature: 50100

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFSQTVPELVAWARKNDFSITLPTERLAFLMAIAALNGERLDGEMSEGELVDAFRHVS
CCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
KGFEQTTETVTVRANNAINDMVRQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREF
HHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH
STLRLSMQLSIVAQELQRAAEAAEEGGDEFHWHRNVFAPLKYSVAEIFDSIDMTQRLMDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQHSVKEDIAALLNQDWRAAIASCEMLLSETSGTLRELQDTLEAAGDKLQANLLRIQEAT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IGNAGLDLVDKLVFDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
LRQSVQHYFDNPWTLTHANADRLLDMRDEELALRSEEVTGELPPDLEFEEFNAIREQLTA
HHHHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MIEQALLVYQQQQIPLNLGEVMRDYLAQYPRARHFDVARILVDQAVRLGVAEADFSGLPA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
EWLAINDYGAKVQAHVINKY
HHEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
SEFSQTVPELVAWARKNDFSITLPTERLAFLMAIAALNGERLDGEMSEGELVDAFRHVS
CHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
KGFEQTTETVTVRANNAINDMVRQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREF
HHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH
STLRLSMQLSIVAQELQRAAEAAEEGGDEFHWHRNVFAPLKYSVAEIFDSIDMTQRLMDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQHSVKEDIAALLNQDWRAAIASCEMLLSETSGTLRELQDTLEAAGDKLQANLLRIQEAT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IGNAGLDLVDKLVFDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
LRQSVQHYFDNPWTLTHANADRLLDMRDEELALRSEEVTGELPPDLEFEEFNAIREQLTA
HHHHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MIEQALLVYQQQQIPLNLGEVMRDYLAQYPRARHFDVARILVDQAVRLGVAEADFSGLPA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
EWLAINDYGAKVQAHVINKY
HHEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA