| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is maeA [H]
Identifier: 170024787
GI number: 170024787
Start: 2811624
End: 2813321
Strand: Direct
Name: maeA [H]
Synonym: YPK_2562
Alternate gene names: 170024787
Gene position: 2811624-2813321 (Clockwise)
Preceding gene: 170024786
Following gene: 170024788
Centisome position: 59.96
GC content: 48.23
Gene sequence:
>1698_bases ATGGAACTTGAATACGAAAGTAAGCGCCCCCTGTACATCCCCTACGCTGGTCCAATATTGCTGGAGTTCCCACTTCTCAA TAAAGGCAGTGCTTTTACCAATGATGAGCGTAATCATTTCAATCTACATGGCCTATTGCCAGAAGCGGTTGAAACCATTG AAGAGCAAGCAGAGCGGGCTTACCGCCAGTATCAGGATTTTAAAAACGACGACGATAAGCATATTTATCTGCGCAATATT CAGGATACCAATGAAACGCTGTTTTATCGTCTGCTAGAAGCTCACCTAAGTGAGATGATGCCAATTATCTACACCCCAAC CGTTGGGGAAGCGTGTGAGCACTTTTCTGATATTTATCGCCGTGCACGCGGGTTATTTATTTCCTATCCGAACCGCGAAC ACATTGATGACATGCTACAAAATGCCACCAAACAAAATGTTAAGGTTATCGTCGTCACTGATGGCGAGCGTATTCTGGGC CTTGGCGACCAAGGTATCGGCGGTATGGGTATCCCAATAGGTAAATTATCGTTGTATACCGCATGCGGCGGCATTAGCCC AGCCTACACGTTGCCCGTAGTACTTGATGTCGGGACAAATAACCCACAACGGTTGAATGACCCACTGTATATGGGCTGGC GTCATCCACGAATCTCCGGTGACGAGTACTATGCATTTGTTGATGAATTTATTCAGGCGGTAAAACGTCGTTGGCCAAAT GTCTTGTTGCAGTTTGAAGATTTTGCACAGAAAAATGCCACCCCGCTGCTAAACCGCTATCGCGATGAATTATGCTGTTT CAATGATGATATACAAGGGACCGCGGCAGTCACTCTGGGTAGCCTGATTGCCGCCAGCCATGCTGCGGGTAGCCAACTGC GCGACCAAACAGTCACCTTCCTTGGTGCTGGTTCCGCGGGTTGTGGTATTGCCGAGCAGATCATCGCTCAAATGATGTCA GAGGGCTTAAGCGAAATACAAGCTCGAGCGCGGATCTTTATGGTCGACCGGTTTGGTCTGCTGACAGATAAACTGCCTAA CTTGCTCGATTTCCAAAGTAAATTGGTACAAAAAAGTGACGACCTACACCACTGGAATCTGCACAATGATGCGATTTCAT TACTTGATGTTGTCCGTAATGCCAAACCAACCGTACTCATTGGGGTTTCAGGTCAACCAGGGCTGTTTACTGAAGAGTTG ATCCGTGAAATGCACAGCCATTGCGCCCGGCCTATCGTCATGCCATTGTCTAACCCAACATCACGGGTTGAAGCCCGACC AGAAGATATTATCAACTGGACCGATGGCGCGGCACTGGTTGCCACAGGTAGCCCATTCCCACCAGTCAGTTATAAAGAAA AACTGTATCCTATTGCTCAATGTAATAACTCTTACATCTTCCCCGGTATCGGCTTGGGTGTATTGGCATCTGGTGCGAGC CGTGTCACGGATGGCATGTTAATGGCTGCCAGCCGGGCATTAGCAGAGAGCTCACCACTCGCACGTCATGGCGAAGGGGC CTTACTGCCTAATATCGATGATATTCAGGCGGTATCGAAAGCTATCGCAATGCGGGTCGGTCAAGCCGCTCAATTACAAG GTGTTGCTATTGTGACTTCGGAAGAAGCGTTGTCTAAAGCCATTGAGCACAATTATTGGCAACCACAGTACCGTAGCTAT AAACGCACCTCGTTTTGA
Upstream 100 bases:
>100_bases GCAATTGTCATAATTTGCTAACAAATGCTGTACATATTTTTCTTATCTTTTAGGATCGGGGTAACAATTGCTATTTGATA ACGTTTAAGAGTAAGAACTC
Downstream 100 bases:
>100_bases ATATAATCCGGCCTGTGCTATACCGCAGGCCGGGTACTCAGATGCTATCCACCACCGTTTTTCTACCGTGGTCACTTTTA ACAAAAACAGCGTTGAACAA
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MELEYESKRPLYIPYAGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNI QDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILG LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMS EGLSEIQARARIFMVDRFGLLTDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEEL IREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAS RVTDGMLMAASRALAESSPLARHGEGALLPNIDDIQAVSKAIAMRVGQAAQLQGVAIVTSEEALSKAIEHNYWQPQYRSY KRTSF
Sequences:
>Translated_565_residues MELEYESKRPLYIPYAGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNI QDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILG LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMS EGLSEIQARARIFMVDRFGLLTDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEEL IREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAS RVTDGMLMAASRALAESSPLARHGEGALLPNIDDIQAVSKAIAMRVGQAAQLQGVAIVTSEEALSKAIEHNYWQPQYRSY KRTSF >Mature_565_residues MELEYESKRPLYIPYAGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNI QDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILG LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTFLGAGSAGCGIAEQIIAQMMS EGLSEIQARARIFMVDRFGLLTDKLPNLLDFQSKLVQKSDDLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEEL IREMHSHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAS RVTDGMLMAASRALAESSPLARHGEGALLPNIDDIQAVSKAIAMRVGQAAQLQGVAIVTSEEALSKAIEHNYWQPQYRSY KRTSF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=542, Percent_Identity=43.5424354243542, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI62420882, Length=560, Percent_Identity=41.6071428571429, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI62420880, Length=560, Percent_Identity=41.6071428571429, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI239049447, Length=560, Percent_Identity=41.6071428571429, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI4505145, Length=554, Percent_Identity=41.5162454873646, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI270265879, Length=463, Percent_Identity=44.7084233261339, Blast_Score=378, Evalue=1e-105, Organism=Escherichia coli, GI87081919, Length=565, Percent_Identity=74.8672566371681, Blast_Score=872, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=543, Percent_Identity=43.8305709023941, Blast_Score=420, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322823, Length=559, Percent_Identity=44.9016100178891, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI24646386, Length=516, Percent_Identity=45.3488372093023, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI24646388, Length=516, Percent_Identity=45.3488372093023, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI281362674, Length=540, Percent_Identity=43.8888888888889, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI21356279, Length=540, Percent_Identity=43.8888888888889, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI281362672, Length=540, Percent_Identity=43.8888888888889, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI78707242, Length=539, Percent_Identity=38.5899814471243, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707238, Length=539, Percent_Identity=38.5899814471243, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707240, Length=507, Percent_Identity=39.2504930966469, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI78707232, Length=503, Percent_Identity=37.9721669980119, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI281363505, Length=503, Percent_Identity=37.9721669980119, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI78707236, Length=503, Percent_Identity=37.9721669980119, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI281363503, Length=501, Percent_Identity=37.7245508982036, Blast_Score=358, Evalue=4e-99, Organism=Drosophila melanogaster, GI19922384, Length=538, Percent_Identity=31.0408921933086, Blast_Score=268, Evalue=5e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 62829; Mature: 62829
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEYESKRPLYIPYAGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERA CCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH YRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHH RARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT HHCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHH ACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN HHCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCH VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTF HEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCEEEE LGAGSAGCGIAEQIIAQMMSEGLSEIQARARIFMVDRFGLLTDKLPNLLDFQSKLVQKSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCHHHHHHHHHHHCCC DLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPT CCCEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCH SRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAS HHHCCCHHHHCCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCEECCCCCHHHHHCCHH RVTDGMLMAASRALAESSPLARHGEGALLPNIDDIQAVSKAIAMRVGQAAQLQGVAIVTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEC EEALSKAIEHNYWQPQYRSYKRTSF HHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MELEYESKRPLYIPYAGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERA CCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH YRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHH RARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT HHCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHH ACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN HHCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCH VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASHAAGSQLRDQTVTF HEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCEEEE LGAGSAGCGIAEQIIAQMMSEGLSEIQARARIFMVDRFGLLTDKLPNLLDFQSKLVQKSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCHHHHHHHHHHHCCC DLHHWNLHNDAISLLDVVRNAKPTVLIGVSGQPGLFTEELIREMHSHCARPIVMPLSNPT CCCEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCH SRVEARPEDIINWTDGAALVATGSPFPPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAS HHHCCCHHHHCCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCEECCCCCHHHHHCCHH RVTDGMLMAASRALAESSPLARHGEGALLPNIDDIQAVSKAIAMRVGQAAQLQGVAIVTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEC EEALSKAIEHNYWQPQYRSYKRTSF HHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA