Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170024782

Identifier: 170024782

GI number: 170024782

Start: 2805947

End: 2807200

Strand: Direct

Name: 170024782

Synonym: YPK_2557

Alternate gene names: NA

Gene position: 2805947-2807200 (Clockwise)

Preceding gene: 170024781

Following gene: 170024783

Centisome position: 59.84

GC content: 48.41

Gene sequence:

>1254_bases
ATGGCAACACAAGGTTCCTTGCCGATACCTGAATACAGCCGCAATATGCGGCTGATTGGTCACAGTGACCAAGGTGGCAA
ACCAGACGGTGTACAAGTTATGGTGCATAGGGGCTATGCCTATGTCGGCCATATGGTATCGAAAGGCGTATCAATTATTG
ACGTAAGGGATGCCAAAAACCCGCGTCCCGCAGGTTTCATCGCTGCGCCTCCGAATACCTGGAATGTGCATCTGCAAACT
CATGATGATCTGCTGCTGGTGATTAATGCACGCGACCTATTTGCCGATGCCCGTTTTGCCGAAGAGAAAGTCTATTACAC
CCGTTCAGTCGCCGAAACAGTCAGCACGCGTCAGGAAGGCCGCAATTGGAGCGCGGGTTTACGTATTTTTGATATTTCAA
CGCCAGACAAGCCACGAGAAATCAGTTTCTTACCGCTTGATGGCATTGGTATCCATCGAATCTGGTATGTCGGTGGGCGT
TGGGCGTATGTATCGGCACTGTTAGATGGCTATAGCGATTATATCTTCCTCACCATTGATCTGGCTGATCCGCAAAAGCC
ACAGGTTACCGGACGCTATGCATTACCTGGTATGGATACTGCGGCAGGTGAACAGCCTAACTGGCCAGCAGGCAAACGCT
ATGCGCTGCATCATGCCATTATTAGTGGCGATACCGCTTACGGCAGTTGGCGTGATGGTGGCCTAACCTTATTGGATGTC
AGTGATCGTCACGAACCGAAACTAATAAGCCACCGTAATTGGAGCCCCCCCTTTGGCGGCGGTACTCATACTGCTTTGCC
ACTCCCTGATCGTGATTTATTGGTAGTACTGGATGAGGCCGTGCTGGATAACCAAGAAGATGGCGAGAAACATATCTGGG
TGTTTGATATTCGTGAACCAAGTAACCCGGTGAGTATTTCAACGTTTCCGGTTCCGGAAGAACGAGATTATATAAAAAAA
GGCGCTCATTTTGGCCCACACAATCTGCATGAAAACCGCCCAGGTAGTTTTATCAGTTCATCTCTGATTTTTGCTACTTA
CCAAAATGCTGGGGTCCGAGCTTACGATATCAGTAACCCCTATCATCCAAAAGAAACTGGCGCGTTAGTTCCAGCAGCCC
CCGAAAAAATGATGGATAAGCGCCCTGGTCGCCCACAAATTATTCAATCATGTGATGTATTTGTTGACACTCAAGGCATC
ATCTACAGTACCGATTATAACGGCGGCCTCTCTATCATCGAATATTTAGGTTAA

Upstream 100 bases:

>100_bases
GTAAGATTATCCCCGGTTGGGGTCAGTCTGATGATTTCAACTCTCCTTGGTTTGCGACCCTTGCAGCCCAAAATGGTCAA
TAGATTTGGAGTAAGTATTG

Downstream 100 bases:

>100_bases
CTATCAATCACCCAAGTTAACCATCAAGTAGTTTGGATGTTTATTAACCACTTAGGTTGATCGTAAACTCCTTGAGCTAA
TCAGAAACTACTTGGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQT
HDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGR
WAYVSALLDGYSDYIFLTIDLADPQKPQVTGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV
SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKK
GAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGI
IYSTDYNGGLSIIEYLG

Sequences:

>Translated_417_residues
MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQT
HDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGR
WAYVSALLDGYSDYIFLTIDLADPQKPQVTGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV
SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKK
GAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGI
IYSTDYNGGLSIIEYLG
>Mature_416_residues
ATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQTH
DDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRW
AYVSALLDGYSDYIFLTIDLADPQKPQVTGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDVS
DRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIKKG
AHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGII
YSTDYNGGLSIIEYLG

Specific function: Unknown

COG id: COG5276

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46296; Mature: 46164

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKN
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC
PRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEG
CCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHCC
RNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTID
CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEE
LADPQKPQVTGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV
CCCCCCCCEECEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC
SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREP
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECCC
SNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNP
CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCC
YHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG
CCCHHCCEECCCCCHHHHHCCCCCCHHHHCCEEEEECCCEEEEECCCCCHHHHHHCC
>Mature Secondary Structure 
ATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKN
CCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC
PRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEG
CCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHCC
RNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTID
CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEE
LADPQKPQVTGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLDV
CCCCCCCCEECEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC
SDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREP
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECCC
SNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNP
CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCC
YHPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG
CCCHHCCEECCCCCHHHHHCCCCCCHHHHCCEEEEECCCEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA