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The map label for this gene is udk [H]

Identifier: 170024777

GI number: 170024777

Start: 2799070

End: 2799711

Strand: Reverse

Name: udk [H]

Synonym: YPK_2552

Alternate gene names: 170024777

Gene position: 2799711-2799070 (Counterclockwise)

Preceding gene: 170024778

Following gene: 170024776

Centisome position: 59.7

GC content: 44.08

Gene sequence:

>642_bases
ATGACTGACAAAGCACATCAGTGCGTCATTATTGGGATAGCGGGTGCTTCTGCCTCCGGAAAAAGTCTTATCGCCAGCAC
GTTGTATCGCGAATTACGTGAACAAGTAGGCGACCAACATATTGGTGTTATTCCTGAAGATGGTTATTACAAAGACCAGA
GCCATCTGTCAATGGAAGAGCGGGTCAAAACGAACTACGACCACCCAAGCGCCATGGACCACAATTTATTGTTGGAACAT
TTGCAGGCGTTGAAGGCGGGTAAGCCCGTTGAATTGCCTCTGTACAGCTATACTGAGCACACACGTAAAAAAGAAACGGT
TCATTTAGAACCTAAAAAAGTGATCATTCTTGAAGGTATACTGCTGCTGACGGATATCCGCTTACGGCAGGAAATGAACT
TCTCAATCTTCGTTGATACCCCATTGGATATCTGCCTGATGCGCAGAATGAAGCGTGATGTCAATGAGCGTGGCCGTTCG
ATGGACTCTGTTATGGCCCAATATCAGAAAACAGTCCGTCCTATGTTTCTGCAATTTATAGAACCATCTAAGCAATATGC
TGACATTATCGTTCCTCGTGGCGGTAAAAATAGAATTGCGATCGATATTCTAAAAGCGAAAATCAGTCAGTTCTTTGAGT
AA

Upstream 100 bases:

>100_bases
TTAGCACTGGTATCACACCTGCTAACTCCTTATAATTGCCGCTCGAAGCACTTCGTGTGCTTTGTCTCCCTTCACACTTC
GTAATCAGGTCTTTAATTTT

Downstream 100 bases:

>100_bases
CGTTCGTCTGGACCTTTGCTCCTTTATATGACAGTTTCTGTGGTCTATGGCAGTTTTTGTAGCATACACGCTGTAACATG
CGAATTATTATGGAGATTCT

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEH
LQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRS
MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE

Sequences:

>Translated_213_residues
MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEH
LQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRS
MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>Mature_212_residues
TDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHL
QALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSM
DSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI57863312, Length=203, Percent_Identity=39.9014778325123, Blast_Score=159, Evalue=1e-39,
Organism=Homo sapiens, GI301129207, Length=203, Percent_Identity=39.9014778325123, Blast_Score=159, Evalue=1e-39,
Organism=Homo sapiens, GI18699734, Length=203, Percent_Identity=36.4532019704434, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI13899253, Length=212, Percent_Identity=35.8490566037736, Blast_Score=141, Evalue=5e-34,
Organism=Homo sapiens, GI209863022, Length=159, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=2e-18,
Organism=Escherichia coli, GI87082034, Length=213, Percent_Identity=91.0798122065728, Blast_Score=405, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=37.6811594202899, Blast_Score=150, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=37.6811594202899, Blast_Score=150, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI71981181, Length=213, Percent_Identity=35.6807511737089, Blast_Score=126, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6324339, Length=168, Percent_Identity=32.7380952380952, Blast_Score=108, Evalue=4e-25,
Organism=Drosophila melanogaster, GI221458995, Length=219, Percent_Identity=35.6164383561644, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24649624, Length=218, Percent_Identity=35.3211009174312, Blast_Score=147, Evalue=7e-36,
Organism=Drosophila melanogaster, GI28573516, Length=197, Percent_Identity=38.5786802030457, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI28573514, Length=197, Percent_Identity=38.5786802030457, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI28573512, Length=197, Percent_Identity=38.5786802030457, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI45550449, Length=197, Percent_Identity=38.5786802030457, Blast_Score=145, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24454; Mature: 24323

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHH
RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGI
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCEEEEEHHH
LLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFI
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
CCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHH
RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGI
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCEEEEEHHH
LLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFI
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
CCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA