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The map label for this gene is alcA [H]

Identifier: 170024771

GI number: 170024771

Start: 2790358

End: 2791656

Strand: Reverse

Name: alcA [H]

Synonym: YPK_2546

Alternate gene names: 170024771

Gene position: 2791656-2790358 (Counterclockwise)

Preceding gene: 170024772

Following gene: 170024770

Centisome position: 59.53

GC content: 43.26

Gene sequence:

>1299_bases
ATGCGACCTTATGACTTTATTGGCATCGGTATTGGCCCGTTTAACCTCGGGCTAGCATGTTTAACCCAACCACTAAATGA
TGTTTGCTGTTTGTTTATCGATCAGAAAGCTGGATTTGATTGGCACCCAGGAATGATGCTGGAAAGTGCAACCTTACAAA
CGCCCTTTATGTCAGATTTGGTGACGTTAGCATCGCCTACGCACCCATTAAGTTTTTTAAATTATATCAAGCAACAGGGG
CGGATTTACTCCTTTTATATTCGGGAAAATTTTTTCCTATTACGTAAGGAATATAACCAGTATTGCCAGTGGGCAGTTGA
GCAATTACCTAACTTACGGTTTAACACGCAGGTTGATGACATTCATTATGATGAAGACACCGCGCTATATCGGCTGTACT
GTTCTGATACATGCTCAGGCAGTCGCCATGAGTTTCTGTGCAAGAAACTGGTTCTGGGTACCGGCCCCTCGCCACATATA
CCCGAATGTTGCCAACCTTTTATTCAGCAAATAGTGATGTCCGGCCAGTACCTGGAACATAAAGTGGCGTTACAAAAGAA
ACGCGCTATCACTATTTTGGGCAGTGGGCAAAGTGCGGCCGAAATTTTCTATGATTTGTTGTGTGAAATCGATCGCTTTG
ATTACCAGTTGAATTGGCTTACCCGCTCACCCCGATTCCTCCCACTGGAATATACCAAACTGACGTTGGAAATGACCTCA
CCTGAATATGTGGACTATTTCTATCATCTTCCACCAGAAAAACGTGATGAGCTGAATCTCACCCATAAGCCATTGTATAA
AGGTATTAACGGCACATTGATTAACGATATCTTCGATCTGTTGTATACCAAACGTCTGAACGGTGCTCTCAATGTCAATC
TGTACACCAACAGTGAATTACAGCAGGTGAGTTCGAGCCATGATGGCAAGGGGTTGCACCTGTCAGTGTTGCAGCATGAA
CAGAATCAATTATTCACATTGGAGACTGAAGGTGCTGTTTTGGCGACCGGGTATCACTATCAGCCGCCAACTTTTATTGA
AGGTATACGTCAACATATTCGTTGGGATAATAAAGGGCGCTATGAGGTTCAGCGTAATTACAGCATTGATCGGAATAATA
CGATTTTTGTACAGAATGTAGAGCTACATACCCATGGTTTTGTGACGCCGGATCTCGGTATGGCTTGTTACCGCAATTCT
TGTCTGATTCGTGAAATAACCGGTACTGAATATTATCCGATTGAGAAAAACATTGCTTTTCAGCAATTCAGTGCGCCATC
ACTGAGGAGGAAAGAGTGA

Upstream 100 bases:

>100_bases
GAAATTGTGGATGCCATTATTACCGAGGGTAAAAACTATCCGACTCTCTATAACAGTCAATCATGAGATTGATGTTGTTT
GATCAGGAGTAATTAGAACA

Downstream 100 bases:

>100_bases
TGAACGCTGAGAGGAATATTGAGAGCGATACCGTGGTGAGGAGTGGTGGTTTTCAACTCTGCCCGCTGGTGTTAGCACAT
GATGTCACTTGGCTGACGGA

Product: L-lysine 6-monooxygenase (NADPH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRPYDFIGIGIGPFNLGLACLTQPLNDVCCLFIDQKAGFDWHPGMMLESATLQTPFMSDLVTLASPTHPLSFLNYIKQQG
RIYSFYIRENFFLLRKEYNQYCQWAVEQLPNLRFNTQVDDIHYDEDTALYRLYCSDTCSGSRHEFLCKKLVLGTGPSPHI
PECCQPFIQQIVMSGQYLEHKVALQKKRAITILGSGQSAAEIFYDLLCEIDRFDYQLNWLTRSPRFLPLEYTKLTLEMTS
PEYVDYFYHLPPEKRDELNLTHKPLYKGINGTLINDIFDLLYTKRLNGALNVNLYTNSELQQVSSSHDGKGLHLSVLQHE
QNQLFTLETEGAVLATGYHYQPPTFIEGIRQHIRWDNKGRYEVQRNYSIDRNNTIFVQNVELHTHGFVTPDLGMACYRNS
CLIREITGTEYYPIEKNIAFQQFSAPSLRRKE

Sequences:

>Translated_432_residues
MRPYDFIGIGIGPFNLGLACLTQPLNDVCCLFIDQKAGFDWHPGMMLESATLQTPFMSDLVTLASPTHPLSFLNYIKQQG
RIYSFYIRENFFLLRKEYNQYCQWAVEQLPNLRFNTQVDDIHYDEDTALYRLYCSDTCSGSRHEFLCKKLVLGTGPSPHI
PECCQPFIQQIVMSGQYLEHKVALQKKRAITILGSGQSAAEIFYDLLCEIDRFDYQLNWLTRSPRFLPLEYTKLTLEMTS
PEYVDYFYHLPPEKRDELNLTHKPLYKGINGTLINDIFDLLYTKRLNGALNVNLYTNSELQQVSSSHDGKGLHLSVLQHE
QNQLFTLETEGAVLATGYHYQPPTFIEGIRQHIRWDNKGRYEVQRNYSIDRNNTIFVQNVELHTHGFVTPDLGMACYRNS
CLIREITGTEYYPIEKNIAFQQFSAPSLRRKE
>Mature_432_residues
MRPYDFIGIGIGPFNLGLACLTQPLNDVCCLFIDQKAGFDWHPGMMLESATLQTPFMSDLVTLASPTHPLSFLNYIKQQG
RIYSFYIRENFFLLRKEYNQYCQWAVEQLPNLRFNTQVDDIHYDEDTALYRLYCSDTCSGSRHEFLCKKLVLGTGPSPHI
PECCQPFIQQIVMSGQYLEHKVALQKKRAITILGSGQSAAEIFYDLLCEIDRFDYQLNWLTRSPRFLPLEYTKLTLEMTS
PEYVDYFYHLPPEKRDELNLTHKPLYKGINGTLINDIFDLLYTKRLNGALNVNLYTNSELQQVSSSHDGKGLHLSVLQHE
QNQLFTLETEGAVLATGYHYQPPTFIEGIRQHIRWDNKGRYEVQRNYSIDRNNTIFVQNVELHTHGFVTPDLGMACYRNS
CLIREITGTEYYPIEKNIAFQQFSAPSLRRKE

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50133; Mature: 50133

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYDFIGIGIGPFNLGLACLTQPLNDVCCLFIDQKAGFDWHPGMMLESATLQTPFMSDL
CCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHH
VTLASPTHPLSFLNYIKQQGRIYSFYIRENFFLLRKEYNQYCQWAVEQLPNLRFNTQVDD
HHHCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEHHHHHHHHHHHHHHCCCCEECCCCCC
IHYDEDTALYRLYCSDTCSGSRHEFLCKKLVLGTGPSPHIPECCQPFIQQIVMSGQYLEH
EEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
KVALQKKRAITILGSGQSAAEIFYDLLCEIDRFDYQLNWLTRSPRFLPLEYTKLTLEMTS
HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEEEECC
PEYVDYFYHLPPEKRDELNLTHKPLYKGINGTLINDIFDLLYTKRLNGALNVNLYTNSEL
CCHHHHEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHH
QQVSSSHDGKGLHLSVLQHEQNQLFTLETEGAVLATGYHYQPPTFIEGIRQHIRWDNKGR
HHHHCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
YEVQRNYSIDRNNTIFVQNVELHTHGFVTPDLGMACYRNSCLIREITGTEYYPIEKNIAF
EEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEECCCEEECCCCCCCC
QQFSAPSLRRKE
EECCCCCCCCCC
>Mature Secondary Structure
MRPYDFIGIGIGPFNLGLACLTQPLNDVCCLFIDQKAGFDWHPGMMLESATLQTPFMSDL
CCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHH
VTLASPTHPLSFLNYIKQQGRIYSFYIRENFFLLRKEYNQYCQWAVEQLPNLRFNTQVDD
HHHCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEHHHHHHHHHHHHHHCCCCEECCCCCC
IHYDEDTALYRLYCSDTCSGSRHEFLCKKLVLGTGPSPHIPECCQPFIQQIVMSGQYLEH
EEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
KVALQKKRAITILGSGQSAAEIFYDLLCEIDRFDYQLNWLTRSPRFLPLEYTKLTLEMTS
HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEEEECC
PEYVDYFYHLPPEKRDELNLTHKPLYKGINGTLINDIFDLLYTKRLNGALNVNLYTNSEL
CCHHHHEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHH
QQVSSSHDGKGLHLSVLQHEQNQLFTLETEGAVLATGYHYQPPTFIEGIRQHIRWDNKGR
HHHHCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
YEVQRNYSIDRNNTIFVQNVELHTHGFVTPDLGMACYRNSCLIREITGTEYYPIEKNIAF
EEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEECCCEEECCCCCCCC
QQFSAPSLRRKE
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8566764; 12910271 [H]