| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fpvA [H]
Identifier: 170024764
GI number: 170024764
Start: 2781473
End: 2783734
Strand: Direct
Name: fpvA [H]
Synonym: YPK_2539
Alternate gene names: 170024764
Gene position: 2781473-2783734 (Clockwise)
Preceding gene: 170024763
Following gene: 170024765
Centisome position: 59.31
GC content: 49.43
Gene sequence:
>2262_bases ATGAGAATACTAGAAAAAAATCACGGCAAAAGCCGAGTGCGTTTTAACTGCACACACACTATCAAACCAGCGGCATGGGT GCTTGCTGCTAATGTATCGTTGTTGGGTTGTGCATATGCCGCGACTGACGAGAATAATAGTCAGAAAAAAGAAAGAGAAA ACAACCCTGCGAATACCACCATAACCGTTACGGCATCACCATTGCGTCATGCTGGCGTCACAGAAGACAGTGGCAGCTAC AACACGTCATCAATGTCGACAGCAACTGGCCTGAATATTTCAGCACGGGAAACCCCACAGTCGGTAAGTGTTATGACTAA ACAGCGCATGCGTGATCAAAACCTGAACAGCGTCGAAAGTGCCGTGAATAACATCACCGGCATCAGTGTGCGCCAGTTTG ACAGTGATCGTTTCGGTTTTACCTCTCGTGGCATGGCCGTTAATAATGTTATGCGAGATGGCGTCGCCACCTTTTACGAT ACCCGCTTTAATTATGGTGATAACACGCTTGATACCGATATGTTTGATCGTATTGAAGTGGTTCGAGGTGCGGCAGGCTT AATGGCTGGGCCGGGTAACCCTTCCGCCGTTATTAACCTTGTGCGCAAACGCCCCACACAGGATTTTCGCGGCAGTGTGT CGGCAGGTGTTGGTTCATGGGAGAAATGGCGTACGGCGCTAGATATCTCCGGCCCCCTCAATAGTGAAGGCAGTGTGCGC GGGCGTTTTGTCACGGCTTATGAAGATAAGAACTCTTTTGTTAACCGCTATGATCAAAGTAAAAACCCGTTTTACGGTAT CTTGGAGATAGATGTCACCCCCAATACCCTATTCACCTTTGGTGCCGATACACAACGGACTCTAACCCGGGGCGGTATGT TTGGTGGGCTTCCCCTGTTTAACAGCGCTGGTGGGCGGACAAATTATGCCCAATCCGCCACCACCGCATCGGATTGGGCA TCCGCCGAAACCCGAACTCAAACGCTGTTTAGCAGTCTGCAACACAATTTTGATAACGGCTGGAATATTAAAGGCACCTT TACCTTTGATAACGATAAGCTGCGCCAAGACGTGATGTGGCCCACCGGTTATCCCGACCCACAAACCAACATAGGTATGC GGCCAGGCAGTCTGTCACTGATTGATGGTGCCCGCCGTCAGCAAAATTACGATATTCAAGTCAATGGTCAGTACAGCCTG TTTGGCCGCCAACATCAGTTGGGTTTGGGCTGGAATCGTCAACGACAAAATATTGATAACGACTATTATCTGGCGACCTG TAATGCCACCAGAACCTGTCCCGACCTTGGGGATTTCACCCTGCCGGGCTGGCAATATCCTAAGCCTGTTTGGAGTGATA AACGGGCTTATGGTTCGAAAGGGCGCAGCGATCAATCCTCGCAGTATGTGGTGACCCAACTCTCTCTGATTGACCCGTTA ACCTTGATCCTTGGTGGCCGCCTGACCACTTGGGAAACCCGTGGTGATAACTTCGGTACGCCACAAAATGCTCGTTATAA GAATGAGTTTGTCCCATACAGCGGCCTGACTTATGACATTAATCACGATTTGTCGGTTTATACCAGTTATACCGAAATAT TTAACCCGGAAAACCGTCGGGACCGTAATAACACATTATTGGCCCCGGTGAGTGGGCAGAATTACGAAGCCGGTTTGAAA GGTGTTGCCTTCGATAATAGTCTTGATTATTCACTGGCAGTGTTTGAAATCCGTCAGAATAATATGCCCGTACCGGACAC CACCGCCCCCCGCTTGCCGGATAACAGCCAGCCTTACTTCGCCGTCGACGGTACTAAAACCCGTGGTTTTGAAGCGGAAG TCAGTGGAAAAATGACTGAAGACTGGAATATTTCTGCGGGCTATACCCAGTACAACGTGAAACTGCCGAGCTCAAATACC CAGACACCTGTCACCCCAGTCACACCACGGAAAGTCTTAAAACTCTTCACCACCTATACCTTACCGGGGCAACTAAACGA TCTGACCCTCGGCGGTGGCGTCAACTGGCAAAGCCAAATCGCCAGAAACCTCAGTAGCCCAATCGGTATTCAACAAATCG GTCAAGGCAGTTTTGCCATTTACAGCCTGATGAGCCGCTACCAGTTTACCCCTCAGCTCTCCTTAACGGTCAATCTGGAT AACCTGTTTAATCAGCATTACTACACACAAATCGGCCAATACAACCAATACTTGTTAGGCGCACCACGCAATGTCGATGC CACCGTGCGCTACACCTTCTAA
Upstream 100 bases:
>100_bases TATATTTTTTAAAAATCAATATATTGAAACGCCATGACTGGCATTTTCACAACACCATAAAGACAAACTTCCCATATTTT TATTTAGTGAGAATAATTAG
Downstream 100 bases:
>100_bases GGATTGCAGTTGGATACCCTCACAGCCGGCCACTTTTCCGGCTGTATCTTTTGCCAACGTCTTCAGAAAGCACGATATGG ATACACCAAATGAATAAAAC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MRILEKNHGKSRVRFNCTHTIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTTITVTASPLRHAGVTEDSGSY NTSSMSTATGLNISARETPQSVSVMTKQRMRDQNLNSVESAVNNITGISVRQFDSDRFGFTSRGMAVNNVMRDGVATFYD TRFNYGDNTLDTDMFDRIEVVRGAAGLMAGPGNPSAVINLVRKRPTQDFRGSVSAGVGSWEKWRTALDISGPLNSEGSVR GRFVTAYEDKNSFVNRYDQSKNPFYGILEIDVTPNTLFTFGADTQRTLTRGGMFGGLPLFNSAGGRTNYAQSATTASDWA SAETRTQTLFSSLQHNFDNGWNIKGTFTFDNDKLRQDVMWPTGYPDPQTNIGMRPGSLSLIDGARRQQNYDIQVNGQYSL FGRQHQLGLGWNRQRQNIDNDYYLATCNATRTCPDLGDFTLPGWQYPKPVWSDKRAYGSKGRSDQSSQYVVTQLSLIDPL TLILGGRLTTWETRGDNFGTPQNARYKNEFVPYSGLTYDINHDLSVYTSYTEIFNPENRRDRNNTLLAPVSGQNYEAGLK GVAFDNSLDYSLAVFEIRQNNMPVPDTTAPRLPDNSQPYFAVDGTKTRGFEAEVSGKMTEDWNISAGYTQYNVKLPSSNT QTPVTPVTPRKVLKLFTTYTLPGQLNDLTLGGGVNWQSQIARNLSSPIGIQQIGQGSFAIYSLMSRYQFTPQLSLTVNLD NLFNQHYYTQIGQYNQYLLGAPRNVDATVRYTF
Sequences:
>Translated_753_residues MRILEKNHGKSRVRFNCTHTIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTTITVTASPLRHAGVTEDSGSY NTSSMSTATGLNISARETPQSVSVMTKQRMRDQNLNSVESAVNNITGISVRQFDSDRFGFTSRGMAVNNVMRDGVATFYD TRFNYGDNTLDTDMFDRIEVVRGAAGLMAGPGNPSAVINLVRKRPTQDFRGSVSAGVGSWEKWRTALDISGPLNSEGSVR GRFVTAYEDKNSFVNRYDQSKNPFYGILEIDVTPNTLFTFGADTQRTLTRGGMFGGLPLFNSAGGRTNYAQSATTASDWA SAETRTQTLFSSLQHNFDNGWNIKGTFTFDNDKLRQDVMWPTGYPDPQTNIGMRPGSLSLIDGARRQQNYDIQVNGQYSL FGRQHQLGLGWNRQRQNIDNDYYLATCNATRTCPDLGDFTLPGWQYPKPVWSDKRAYGSKGRSDQSSQYVVTQLSLIDPL TLILGGRLTTWETRGDNFGTPQNARYKNEFVPYSGLTYDINHDLSVYTSYTEIFNPENRRDRNNTLLAPVSGQNYEAGLK GVAFDNSLDYSLAVFEIRQNNMPVPDTTAPRLPDNSQPYFAVDGTKTRGFEAEVSGKMTEDWNISAGYTQYNVKLPSSNT QTPVTPVTPRKVLKLFTTYTLPGQLNDLTLGGGVNWQSQIARNLSSPIGIQQIGQGSFAIYSLMSRYQFTPQLSLTVNLD NLFNQHYYTQIGQYNQYLLGAPRNVDATVRYTF >Mature_753_residues MRILEKNHGKSRVRFNCTHTIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTTITVTASPLRHAGVTEDSGSY NTSSMSTATGLNISARETPQSVSVMTKQRMRDQNLNSVESAVNNITGISVRQFDSDRFGFTSRGMAVNNVMRDGVATFYD TRFNYGDNTLDTDMFDRIEVVRGAAGLMAGPGNPSAVINLVRKRPTQDFRGSVSAGVGSWEKWRTALDISGPLNSEGSVR GRFVTAYEDKNSFVNRYDQSKNPFYGILEIDVTPNTLFTFGADTQRTLTRGGMFGGLPLFNSAGGRTNYAQSATTASDWA SAETRTQTLFSSLQHNFDNGWNIKGTFTFDNDKLRQDVMWPTGYPDPQTNIGMRPGSLSLIDGARRQQNYDIQVNGQYSL FGRQHQLGLGWNRQRQNIDNDYYLATCNATRTCPDLGDFTLPGWQYPKPVWSDKRAYGSKGRSDQSSQYVVTQLSLIDPL TLILGGRLTTWETRGDNFGTPQNARYKNEFVPYSGLTYDINHDLSVYTSYTEIFNPENRRDRNNTLLAPVSGQNYEAGLK GVAFDNSLDYSLAVFEIRQNNMPVPDTTAPRLPDNSQPYFAVDGTKTRGFEAEVSGKMTEDWNISAGYTQYNVKLPSSNT QTPVTPVTPRKVLKLFTTYTLPGQLNDLTLGGGVNWQSQIARNLSSPIGIQQIGQGSFAIYSLMSRYQFTPQLSLTVNLD NLFNQHYYTQIGQYNQYLLGAPRNVDATVRYTF
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=689, Percent_Identity=36.5747460087083, Blast_Score=430, Evalue=1e-121, Organism=Escherichia coli, GI1786344, Length=783, Percent_Identity=22.9885057471264, Blast_Score=129, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83854; Mature: 83854
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILEKNHGKSRVRFNCTHTIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTT CCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHCCCCCCCE ITVTASPLRHAGVTEDSGSYNTSSMSTATGLNISARETPQSVSVMTKQRMRDQNLNSVES EEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH AVNNITGISVRQFDSDRFGFTSRGMAVNNVMRDGVATFYDTRFNYGDNTLDTDMFDRIEV HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCHHHEEECCCCCCCCCCCHHHHHHHHH VRGAAGLMAGPGNPSAVINLVRKRPTQDFRGSVSAGVGSWEKWRTALDISGPLNSEGSVR HHCCCCEECCCCCHHHHHHHHHHCCCHHHCCCHHCCCCCCHHHHEEEEECCCCCCCCCCC GRFVTAYEDKNSFVNRYDQSKNPFYGILEIDVTPNTLFTFGADTQRTLTRGGMFGGLPLF EEEEEEECCCCHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCC NSAGGRTNYAQSATTASDWASAETRTQTLFSSLQHNFDNGWNIKGTFTFDNDKLRQDVMW CCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCC PTGYPDPQTNIGMRPGSLSLIDGARRQQNYDIQVNGQYSLFGRQHQLGLGWNRQRQNIDN CCCCCCCCCCCCCCCCCEEEECCHHHCCCCCEEECCEEEEECCCEECCCCCCHHHCCCCC DYYLATCNATRTCPDLGDFTLPGWQYPKPVWSDKRAYGSKGRSDQSSQYVVTQLSLIDPL CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHCHH TLILGGRLTTWETRGDNFGTPQNARYKNEFVPYSGLTYDINHDLSVYTSYTEIFNPENRR HHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHCCCCCCC DRNNTLLAPVSGQNYEAGLKGVAFDNSLDYSLAVFEIRQNNMPVPDTTAPRLPDNSQPYF CCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEE AVDGTKTRGFEAEVSGKMTEDWNISAGYTQYNVKLPSSNTQTPVTPVTPRKVLKLFTTYT EECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEE LPGQLNDLTLGGGVNWQSQIARNLSSPIGIQQIGQGSFAIYSLMSRYQFTPQLSLTVNLD CCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEEHH NLFNQHYYTQIGQYNQYLLGAPRNVDATVRYTF HHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC >Mature Secondary Structure MRILEKNHGKSRVRFNCTHTIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTT CCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHCCCCCCCE ITVTASPLRHAGVTEDSGSYNTSSMSTATGLNISARETPQSVSVMTKQRMRDQNLNSVES EEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH AVNNITGISVRQFDSDRFGFTSRGMAVNNVMRDGVATFYDTRFNYGDNTLDTDMFDRIEV HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCHHHEEECCCCCCCCCCCHHHHHHHHH VRGAAGLMAGPGNPSAVINLVRKRPTQDFRGSVSAGVGSWEKWRTALDISGPLNSEGSVR HHCCCCEECCCCCHHHHHHHHHHCCCHHHCCCHHCCCCCCHHHHEEEEECCCCCCCCCCC GRFVTAYEDKNSFVNRYDQSKNPFYGILEIDVTPNTLFTFGADTQRTLTRGGMFGGLPLF EEEEEEECCCCHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCC NSAGGRTNYAQSATTASDWASAETRTQTLFSSLQHNFDNGWNIKGTFTFDNDKLRQDVMW CCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCC PTGYPDPQTNIGMRPGSLSLIDGARRQQNYDIQVNGQYSLFGRQHQLGLGWNRQRQNIDN CCCCCCCCCCCCCCCCCEEEECCHHHCCCCCEEECCEEEEECCCEECCCCCCHHHCCCCC DYYLATCNATRTCPDLGDFTLPGWQYPKPVWSDKRAYGSKGRSDQSSQYVVTQLSLIDPL CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHCHH TLILGGRLTTWETRGDNFGTPQNARYKNEFVPYSGLTYDINHDLSVYTSYTEIFNPENRR HHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHCCCCCCC DRNNTLLAPVSGQNYEAGLKGVAFDNSLDYSLAVFEIRQNNMPVPDTTAPRLPDNSQPYF CCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEE AVDGTKTRGFEAEVSGKMTEDWNISAGYTQYNVKLPSSNTQTPVTPVTPRKVLKLFTTYT EECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEE LPGQLNDLTLGGGVNWQSQIARNLSSPIGIQQIGQGSFAIYSLMSRYQFTPQLSLTVNLD CCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEEHH NLFNQHYYTQIGQYNQYLLGAPRNVDATVRYTF HHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]