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The map label for this gene is rbsC [H]

Identifier: 170024746

GI number: 170024746

Start: 2763379

End: 2764374

Strand: Direct

Name: rbsC [H]

Synonym: YPK_2521

Alternate gene names: 170024746

Gene position: 2763379-2764374 (Clockwise)

Preceding gene: 170024745

Following gene: 170024747

Centisome position: 58.93

GC content: 51.81

Gene sequence:

>996_bases
GTGAGCAAAGAATTACCCCTACCAGACGTGCAGCCTTGGCGTCACCAGTTGTTTGATTTTCTCTACAAATGGGGAATGTT
GCTCACCGTTGTTGCGTTAATCGCGCTATTTGGTTTGGCATCGGATAACTTCCTCGATCCAAACAATATCATCAACATTT
TACGTTCTATCGCCATTGTGACCGTAATTGCCATCGGGGTGTCTATCTCGCTGTCGATTGGCGGTTTTGACCTGTCAGTA
GGCTCCACGGCCTCGTTGGCGAATGCCGTCGTGGTATCACTGTTTGTCTGGTATGGCTTCGGTACCACGGGCGCAATAAT
CCTGACGCTGCTGATTTGCACACTGGTCGGTCTGTTTAATGCTTTCCTGATTGTGGTGCTGAAAATCCCCGATATGCTAG
CCACCCTGGCCAGCCTGTTTGTGATTCAGGGGGTCGCCATGACTTACAGCCGCGGCGGTTCGATCACTCAAAGTATGTTG
TTGCCCAGTGGCGATATGGCGGAAGGGGTTATTCCAGAAATTTTTTCCGCACTCGGCCAGGTACCGGTTATCGTGCTGAT
TATGTTAGCGGTCACCGTGGTGGTGCAGTTGTATTTATCGCTGACCAAGCACGGGCGGCGGATGTACGCCATTGGCGGTA
ACCCACAAGCCGCGCGGCTTGCGGGGATCCGCACGGTTCGCTATCGGGTACTGGCTTATGTGCTCTCCGCTCAATTGGCG
GCACTCGGTGGGATCTTGCTGGCTTCACGCATTGGTTCATCGCAGGTGAATGCTGGCAGTGGTTATTTGATGGACGCCGT
CGCCGCCGCCTATATCGGCTTTTCACTGGCTGGCTCGGGTAAACCTAATGCGTTCGGCACCTTAATTGGCGCGATAATTT
TGGGTGTCTTGCAAAATGGGTTGGTGATGTTGTCAGTGCCTTATTATGCGATGGATATTATTAAAGGCTTGGTATTAGCT
ATGGCCCTGGCACTGACTTATATTCAGAAACGGTGA

Upstream 100 bases:

>100_bases
GTATCTGCGTATTGTGGGATGGCCGAATTGTTGCCGAACTGAATGCTGCAGAGGTCGATGAAGAGACATTATTACTATTT
TCAACCGGAGGAACCCCTCA

Downstream 100 bases:

>100_bases
TCGGAAATCAAAATAAGGTGCAGCGCACAAATCCCGATGAGCTGGCTCCAGTCAGTGATGCGGAAGTTGTATGCTGCAAC
AGGCCATGCAACGCTATGGA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGGFDLSV
GSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSML
LPSGDMAEGVIPEIFSALGQVPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLA
ALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVPYYAMDIIKGLVLA
MALALTYIQKR

Sequences:

>Translated_331_residues
MSKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGGFDLSV
GSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSML
LPSGDMAEGVIPEIFSALGQVPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLA
ALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVPYYAMDIIKGLVLA
MALALTYIQKR
>Mature_330_residues
SKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGGFDLSVG
STASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSMLL
PSGDMAEGVIPEIFSALGQVPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLAA
LGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVPYYAMDIIKGLVLAM
ALALTYIQKR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=32.3809523809524, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788896, Length=328, Percent_Identity=28.9634146341463, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1789992, Length=360, Percent_Identity=27.2222222222222, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI145693152, Length=321, Percent_Identity=31.1526479750779, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787793, Length=284, Percent_Identity=31.6901408450704, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790524, Length=314, Percent_Identity=27.3885350318471, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI87082395, Length=258, Percent_Identity=32.9457364341085, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788471, Length=336, Percent_Identity=28.8690476190476, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787794, Length=305, Percent_Identity=28.8524590163934, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI145693214, Length=259, Percent_Identity=31.6602316602317, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34927; Mature: 34796

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TVIAIGVSISLSIGGFDLSVGSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFN
HHHHHHHHEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCC
VPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
LVMLSVPYYAMDIIKGLVLAMALALTYIQKR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TVIAIGVSISLSIGGFDLSVGSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFN
HHHHHHHHEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCC
VPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
LVMLSVPYYAMDIIKGLVLAMALALTYIQKR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]