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The map label for this gene is b2083 [C]

Identifier: 170024577

GI number: 170024577

Start: 2585468

End: 2586562

Strand: Direct

Name: b2083 [C]

Synonym: YPK_2352

Alternate gene names: 170024577

Gene position: 2585468-2586562 (Clockwise)

Preceding gene: 170024576

Following gene: 170024578

Centisome position: 55.13

GC content: 47.95

Gene sequence:

>1095_bases
ATGATAAGCATTGATACCGGGCATAACGAACCCGATTATTCTATTTCCGTGGATGGCATAGATAAAACGGGTGGCATTAA
AAAGCGCCTAATGTCATTGACGTTAACTGATAACCGGGGCTTTGAAGCCGATCAATTAGATATTGAGTTTGATGACGCGG
ACGGTAAAGTAGAGTTACCCCGTCGTGGCGCTAAAATAGCGGTATCACTCGGCTGGAAAGGCGCAGCGCTGATCGATAAA
GGTACATTCACCGTAGATGAAATAGAGCATAGCGGCGCACCGGATAAGCTGACGATTCGCGCCCGCAGTGCGGATTTTCG
TGAAACGCTTAATATTCGCCGTGATCACTCTTACCATAAGACCACGATTGGCGGGATAATTAAAACCGTTGCCGAGCGAA
ATAAACTCACGCCAACATTAAATAAAGCGATGTCTGATTTAGCTGTTGACCATATAGACCAAACCAACGAATCAGACGGT
AATTTCATTACCCGACTGGCGAAACAATATGGCGCTATTGCCGCTGTGAAAAATGGCAATTTGTTATTTATTCGTCAGGG
CCAGTCGAAAACTGCCAGCGGTAAACCGATCCCGATGATGACCATTATCCGCAGCTTGGGCGACGGCCATCAGTTTAGTA
TGGCTGACCGGGGCGCTTATACCGGTGTGGTAGCGAACTGGCTCAACACCCGCACCACTGAAAAACCCGTGGTTAAGGTA
AAGCGAAAACGCAAACGTAAGGCGACCACTACCGCCAAGCCCAAAGAGCCAGAAGAGAAACAGGGTGAATATCTGATCGG
TACTGATGAGAATGTGCTGACCTTACGCACCACTTACGCCAGTAAAAACAATGCACAGCGAGCGGCTAAATCGAATTGGG
AACGGCTGCAACGGGGCGCGGCGAAATTCTCTATTCAGCTTGCAAAGGGGCGCGCAGATCTCTATCCAGAAGTGCCGGTT
AAAGTTACTGGATTCAAAAAACAGATTGATGAAGCAGATTGGACGCTGGTCACGGTGACCCATTCCGTGAGTGACAGCGG
TTTTACTACCGCGCTGGAATTAGAAGTGAAAATAGATGATTTGGATATGGAATGA

Upstream 100 bases:

>100_bases
AACGTACCGATGAATCACTAAAAGAGATGTTTGGGGATCTGTCTCAGCAATTTGACGATATCGCCAGCAGCGTATCGAAC
ACCGCCGCCGGATTATTATC

Downstream 100 bases:

>100_bases
TGATTTTTAATCAATAATAACGCATAATTATCATTAATACCGACCACAGTCGGGATGATAACGGACTCGCTATCATGTTC
AATTGCCCTTTATGCCATCA

Product: late control D family protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Bacteriophage Regulatory Protein; Phage Late Control Gene D Protein; Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Regulator Of Late Gene Expression; Bacteriophage Protein; Phage Protein; Phage Late Control D Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Prophage; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Tail Assembly T; Late Gene Regulator

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELPRRGAKIAVSLGWKGAALIDK
GTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHKTTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDG
NFITRLAKQYGAIAAVKNGNLLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGAAKFSIQLAKGRADLYPEVPV
KVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDDLDME

Sequences:

>Translated_364_residues
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELPRRGAKIAVSLGWKGAALIDK
GTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHKTTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDG
NFITRLAKQYGAIAAVKNGNLLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGAAKFSIQLAKGRADLYPEVPV
KVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDDLDME
>Mature_364_residues
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELPRRGAKIAVSLGWKGAALIDK
GTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHKTTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDG
NFITRLAKQYGAIAAVKNGNLLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGAAKFSIQLAKGRADLYPEVPV
KVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDDLDME

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40234; Mature: 40234

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELP
CEEECCCCCCCCCEEEECCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEECCCCEEECC
RRGAKIAVSLGWKGAALIDKGTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHK
CCCCEEEEEECCCCEEEEECCCEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHHH
TTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDGNFITRLAKQYGAIAAVKNGN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCC
LLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
EEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHH
KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGA
HHHHHHHCCCCCCCCCCHHHCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC
AKFSIQLAKGRADLYPEVPVKVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDD
CEEEEEEECCCCCCCCCCCEEEECHHHHCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEC
LDME
CCCC
>Mature Secondary Structure
MISIDTGHNEPDYSISVDGIDKTGGIKKRLMSLTLTDNRGFEADQLDIEFDDADGKVELP
CEEECCCCCCCCCEEEECCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEECCCCEEECC
RRGAKIAVSLGWKGAALIDKGTFTVDEIEHSGAPDKLTIRARSADFRETLNIRRDHSYHK
CCCCEEEEEECCCCEEEEECCCEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHHH
TTIGGIIKTVAERNKLTPTLNKAMSDLAVDHIDQTNESDGNFITRLAKQYGAIAAVKNGN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCC
LLFIRQGQSKTASGKPIPMMTIIRSLGDGHQFSMADRGAYTGVVANWLNTRTTEKPVVKV
EEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHH
KRKRKRKATTTAKPKEPEEKQGEYLIGTDENVLTLRTTYASKNNAQRAAKSNWERLQRGA
HHHHHHHCCCCCCCCCCHHHCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC
AKFSIQLAKGRADLYPEVPVKVTGFKKQIDEADWTLVTVTHSVSDSGFTTALELEVKIDD
CEEEEEEECCCCCCCCCCCEEEECHHHHCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEC
LDME
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA