| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024574
Identifier: 170024574
GI number: 170024574
Start: 2581606
End: 2581953
Strand: Direct
Name: 170024574
Synonym: YPK_2349
Alternate gene names: NA
Gene position: 2581606-2581953 (Clockwise)
Preceding gene: 170024573
Following gene: 170024575
Centisome position: 55.05
GC content: 50.57
Gene sequence:
>348_bases ATGAGCAAGATAACCACTGTAGATGCATTACCGTCCGTGCCTGTCGAGACTTCTGCTGATGCCTTTAACGTAGTCACATT AGATGCGCCGATCATGCGAGGTAATACAACAATCACGCAGATCACGGTCAATAAACCCAATACCGGCGCATTGCGCGGTG CCAAATTGCAGGCACTGCTTGATACCGATGTTGATGCGTTGATCCGTGTGCTGCCTCGCGTCACCACCCCTAACCTGACC GTGCCAGAAATCAACAATTTGGAACCAGCCGATATTTACGCGTTATCGCAGGCACTGGCGCTTTTTTTCTTGCCGAACTC GGTGCGGTCAGATTTCCTGACAGCTTAA
Upstream 100 bases:
>100_bases ACGGCGTCGATATGCTGGAAGCCCACCGCCGCAACATCGGCCTGTAATATCACGGTGCGGATAACTCCGCGCCTTTACCC CTTATTTATTGGTAACCATT
Downstream 100 bases:
>100_bases CCGTTGACGATTTGATAGCGGATATTGCGATAACCTTTCACTGGCCGCCCTCCGCTACCGAAGAGATGTCCTTAGGTGAA CTTTTAGAGTGGCGACATAA
Product: tail E family protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage Tail Protein E; Phage Tail E Family Protein; Phage-Related Tail Protein; Gp28 Phage Tail Protein E; Phage P2 GpE-Like Tail Protein; Tail Bacteriophage; Prophage Tail Protein; GpE+E; Phage Tail E; Bacteriophage-Related Tail Protein; Phage Related Tail Protein; Tail Protein E; Phage Tail Protein E\; Phage Protein; Tail Protein
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSKITTVDALPSVPVETSADAFNVVTLDAPIMRGNTTITQITVNKPNTGALRGAKLQALLDTDVDALIRVLPRVTTPNLT VPEINNLEPADIYALSQALALFFLPNSVRSDFLTA
Sequences:
>Translated_115_residues MSKITTVDALPSVPVETSADAFNVVTLDAPIMRGNTTITQITVNKPNTGALRGAKLQALLDTDVDALIRVLPRVTTPNLT VPEINNLEPADIYALSQALALFFLPNSVRSDFLTA >Mature_114_residues SKITTVDALPSVPVETSADAFNVVTLDAPIMRGNTTITQITVNKPNTGALRGAKLQALLDTDVDALIRVLPRVTTPNLTV PEINNLEPADIYALSQALALFFLPNSVRSDFLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12290; Mature: 12159
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKITTVDALPSVPVETSADAFNVVTLDAPIMRGNTTITQITVNKPNTGALRGAKLQALL CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEEECCCCCCCCCCCEEEEEC DTDVDALIRVLPRVTTPNLTVPEINNLEPADIYALSQALALFFLPNSVRSDFLTA CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHHHHCCCC >Mature Secondary Structure SKITTVDALPSVPVETSADAFNVVTLDAPIMRGNTTITQITVNKPNTGALRGAKLQALL CCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEEECCCCCCCCCCCEEEEEC DTDVDALIRVLPRVTTPNLTVPEINNLEPADIYALSQALALFFLPNSVRSDFLTA CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA