| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is phoE [H]
Identifier: 170024453
GI number: 170024453
Start: 2464981
End: 2466063
Strand: Reverse
Name: phoE [H]
Synonym: YPK_2224
Alternate gene names: 170024453
Gene position: 2466063-2464981 (Counterclockwise)
Preceding gene: 170024454
Following gene: 170024449
Centisome position: 52.59
GC content: 44.51
Gene sequence:
>1083_bases ATGAAAAACATCGCGATGGCTTTGGCAGCCACACTGGGTATCATTCCAGCTCTTTCAAGTGCAGCGGAAATTTATAATAA AGATGGCAACAAGTTGGATTTTTATGGGCGGGTTGCTGCGAAATACCTATTTAAAAAACAGAGCAATGAAGATGCAACTT ATGTGCGTATTGGTTTCAAGGGTGAAACAAAAATAAATAGCCAGCTAACTGGTTTCGGTCAGTGGGAATATAACATCGCA GCTAACAACACAGAATCTCAGGGTGATAAGGGCAATAAAACCCGTTTGGGCTTTGCGGGTCTGAAGTTAGCTGATTACGG GTCTTTCGACTATGGCCGCAACTATGGTGTTGTCTATGACGTGCTGTCCTATACCGATATGTTGCCTGAATTTGGTGGTG ATTCCATGGCAGCGACGGATAATTACATGACGGCCCGCTCTACTGGCCTGGCAACCTACCGTAACGATAATTTCTTCGGA CTTGTGGAGGGCTTAAAAGTTGCCGCTCAGTATCAGGGGCGTAACGAAGACGGTGATGTTACCCGAAATGAACGTTCTAT CCAAAAGGCCAATGGTGATGGTTTCGGTTTGTCTTTTAATTATCAAAACATTCAGGGCAGCGGCGTCAGTTTTGCAGGCG CATACTCATCATCTAATCGTACCGAGGGCCAGAAAGAATTAGTGAACAGTGCTGCGGGTGACAAAGCTCAAGCTTGGGCT ACTGGGCTAAAATACGATGCCAATCAGGCCTATATTGCAGCAATGTATGGCGAAACACTAAACATGACGCCGTACAAAAG ACTGATCGCGAACAAAACCCAAAACGTAGAGTTGGTCGCTCAATACCAGTTTGAGAATGGTATCCGCCCGTCTCTTGCCT ACATACAATCTAAAGGTAAGGATCTGGCGGGGGTCGGCGATACGGATCTGGTGAAATATGCTGAAATCGGTGTGACTTAC CATTTCAACAAGAACATGTACACCTATGTTGATTATAAGATTAATTTATTGGATAACGATAAGAACCCATTGGGCTTGAA TACGGATGATGTTGTTGCGGTAAACTTGACTTACCGTTTTTAA
Upstream 100 bases:
>100_bases AACAAGACTTAATTCTCACAGCAAGACTTAATCCTCATCGTAAGATTAAACATTAACGAATTCTGAGGTTAATGTTATAA AAATTAAAAGGAAGATATTA
Downstream 100 bases:
>100_bases GCAGTAGATCTAAAGCGTTATGAATATTGGTGTTATTGCCTTTTTTCTGTGTCGGAAACAGGTGAAATAGAAAGATAGAA CGGCGGGGGAAACCCCGCCT
Product: porin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKNIAMALAATLGIIPALSSAAEIYNKDGNKLDFYGRVAAKYLFKKQSNEDATYVRIGFKGETKINSQLTGFGQWEYNIA ANNTESQGDKGNKTRLGFAGLKLADYGSFDYGRNYGVVYDVLSYTDMLPEFGGDSMAATDNYMTARSTGLATYRNDNFFG LVEGLKVAAQYQGRNEDGDVTRNERSIQKANGDGFGLSFNYQNIQGSGVSFAGAYSSSNRTEGQKELVNSAAGDKAQAWA TGLKYDANQAYIAAMYGETLNMTPYKRLIANKTQNVELVAQYQFENGIRPSLAYIQSKGKDLAGVGDTDLVKYAEIGVTY HFNKNMYTYVDYKINLLDNDKNPLGLNTDDVVAVNLTYRF
Sequences:
>Translated_360_residues MKNIAMALAATLGIIPALSSAAEIYNKDGNKLDFYGRVAAKYLFKKQSNEDATYVRIGFKGETKINSQLTGFGQWEYNIA ANNTESQGDKGNKTRLGFAGLKLADYGSFDYGRNYGVVYDVLSYTDMLPEFGGDSMAATDNYMTARSTGLATYRNDNFFG LVEGLKVAAQYQGRNEDGDVTRNERSIQKANGDGFGLSFNYQNIQGSGVSFAGAYSSSNRTEGQKELVNSAAGDKAQAWA TGLKYDANQAYIAAMYGETLNMTPYKRLIANKTQNVELVAQYQFENGIRPSLAYIQSKGKDLAGVGDTDLVKYAEIGVTY HFNKNMYTYVDYKINLLDNDKNPLGLNTDDVVAVNLTYRF >Mature_360_residues MKNIAMALAATLGIIPALSSAAEIYNKDGNKLDFYGRVAAKYLFKKQSNEDATYVRIGFKGETKINSQLTGFGQWEYNIA ANNTESQGDKGNKTRLGFAGLKLADYGSFDYGRNYGVVYDVLSYTDMLPEFGGDSMAATDNYMTARSTGLATYRNDNFFG LVEGLKVAAQYQGRNEDGDVTRNERSIQKANGDGFGLSFNYQNIQGSGVSFAGAYSSSNRTEGQKELVNSAAGDKAQAWA TGLKYDANQAYIAAMYGETLNMTPYKRLIANKTQNVELVAQYQFENGIRPSLAYIQSKGKDLAGVGDTDLVKYAEIGVTY HFNKNMYTYVDYKINLLDNDKNPLGLNTDDVVAVNLTYRF
Specific function: Uptake of inorganic phosphate, phosphorylated compounds, and some other negatively charged solutes [H]
COG id: COG3203
COG function: function code M; Outer membrane protein (porin)
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Gram-negative porin family [H]
Homologues:
Organism=Escherichia coli, GI1787641, Length=359, Percent_Identity=57.9387186629526, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1786436, Length=363, Percent_Identity=55.6473829201102, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1787160, Length=374, Percent_Identity=54.2780748663102, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1788544, Length=373, Percent_Identity=52.2788203753351, Blast_Score=349, Evalue=1e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001897 - InterPro: IPR013793 - InterPro: IPR001702 [H]
Pfam domain/function: PF00267 Porin_1 [H]
EC number: NA
Molecular weight: Translated: 39623; Mature: 39623
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIAMALAATLGIIPALSSAAEIYNKDGNKLDFYGRVAAKYLFKKQSNEDATYVRIGFK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEC GETKINSQLTGFGQWEYNIAANNTESQGDKGNKTRLGFAGLKLADYGSFDYGRNYGVVYD CCCEECCCEEECCEEEEEEECCCCCCCCCCCCCEEEEEECEEEECCCCCCCCCCCCHHHH VLSYTDMLPEFGGDSMAATDNYMTARSTGLATYRNDNFFGLVEGLKVAAQYQGRNEDGDV HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCCC TRNERSIQKANGDGFGLSFNYQNIQGSGVSFAGAYSSSNRTEGQKELVNSAAGDKAQAWA CCCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH TGLKYDANQAYIAAMYGETLNMTPYKRLIANKTQNVELVAQYQFENGIRPSLAYIQSKGK CCCEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCC DLAGVGDTDLVKYAEIGVTYHFNKNMYTYVDYKINLLDNDKNPLGLNTDDVVAVNLTYRF CCCCCCCHHHEEEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKNIAMALAATLGIIPALSSAAEIYNKDGNKLDFYGRVAAKYLFKKQSNEDATYVRIGFK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEC GETKINSQLTGFGQWEYNIAANNTESQGDKGNKTRLGFAGLKLADYGSFDYGRNYGVVYD CCCEECCCEEECCEEEEEEECCCCCCCCCCCCCEEEEEECEEEECCCCCCCCCCCCHHHH VLSYTDMLPEFGGDSMAATDNYMTARSTGLATYRNDNFFGLVEGLKVAAQYQGRNEDGDV HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCCC TRNERSIQKANGDGFGLSFNYQNIQGSGVSFAGAYSSSNRTEGQKELVNSAAGDKAQAWA CCCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH TGLKYDANQAYIAAMYGETLNMTPYKRLIANKTQNVELVAQYQFENGIRPSLAYIQSKGK CCCEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCC DLAGVGDTDLVKYAEIGVTYHFNKNMYTYVDYKINLLDNDKNPLGLNTDDVVAVNLTYRF CCCCCCCHHHEEEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3032618 [H]