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The map label for this gene is yciM [H]

Identifier: 170024261

GI number: 170024261

Start: 2254591

End: 2255760

Strand: Reverse

Name: yciM [H]

Synonym: YPK_2026

Alternate gene names: 170024261

Gene position: 2255760-2254591 (Counterclockwise)

Preceding gene: 170024262

Following gene: 170024259

Centisome position: 48.1

GC content: 49.06

Gene sequence:

>1170_bases
ATGTTAGAAATGCTGTTTCTGCTGTTGCCCGTTGCTGCCGCCTATGGTTGGTATATGGGGCGCAGAAGCGCTCAGCAGGA
TAAGCAACAGGATGCTAACCGCTTGTCACGTGAATACGTGGCTGGGGTTAACTTCCTTCTCTCGAACCAGCAAGATAAAG
CAGTCGATCTCTTCCTCGAAATGTTGAAAGAAGACAGTTCTACGGTCGAGGCTCATCTTACTCTGGGTAATCTGTTCCGC
TCACGCGGCGAAGTTGATCGCGCCATTCGCATCCATCAAGCCTTGATGGAGAGTGCATCCCTGACATTTGAACAACGGCT
ATTGGCTGTTCAGCAACTCGGTCGGGATTACATGGCCGCAGGTTTATATGATCGGGCAGAAGATATGTTCAACCAATTGG
TTGAAGAGCAAGATTTTCGGCTCGGCGCATTACAACAATTACTGATAATTCATCAGGCAACCAGTGATTGGCATAATGCT
ATTGAAGTTGCGGAAAAATTGGTCAAGATGGGCAAAGATAATCAGCGTCTGGAAATTGCGCACTTCTATTGTGAACTTGC
GTTGCAAGCAATGGGCAGTGACGATCTGGATAAGGCCATGGGGTTACTGAAAAAAGCGGCAACGGCGGATAAACAATGTG
CCCGAGTTTCTATTATGCGTGGCCGTGTGCATCTCGCTAAAGGTGAGTATGCCAAAGGCGTTGAAGCGTTGGAGCGAGTA
CTGGAGCAAGATAAAGAAGTCGTCAGTGAAGCATTACCGATGCTCAGTGAATGCTACCAACACCTGCAACAGCCCCAGGC
TTGGGCTAATTTCCTTAAACGTTGTGTGGAAGATAATACCGGTGCGGCGGCTGAACTGATGTTGGCGGAGGTCCTTGAAC
AGCAGGAGGGCCATGATGTCGCGCAAACGTATATTAACCGCCAATTACAGCGCCACCCAACGATGCGCGGTTTTTATCGT
CTAATGGATTACCACTTAGCAGATGCAGAAGAAGGGCGTGCAAAAGAGAGTTTATTGCTATTACGGGACATGGTTGGTGA
GCAAATTCGGACCAAACCACGTTACCGTTGTCATAAGTGTGGTTTCACCGCCCACTCACTCTATTGGCATTGCCCGTCTT
GCCGTGCCTGGGCATCAGTTAAGCCGATCAGAGGATTAGATGGGCAGTAG

Upstream 100 bases:

>100_bases
CGCAGAGCGGAAAATTAAACGTATTGAAACTCAGCTTGAACAGCCTGTTGAGCAAAGCACGCTTGTGTCCACAGCTGCTA
TCAACAAGGAATAATTTTCT

Downstream 100 bases:

>100_bases
GGGGGAATAGTCAGATTAAAGGGGAGTGATGTTCTTTGCTAATAAGGATGTTCTTTGCTAATAAGATCGGGTGAACGGGT
CCACCCGGTTGTTAGCTGTT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MLEMLFLLLPVAAAYGWYMGRRSAQQDKQQDANRLSREYVAGVNFLLSNQQDKAVDLFLEMLKEDSSTVEAHLTLGNLFR
SRGEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLGALQQLLIIHQATSDWHNA
IEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGLLKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERV
LEQDKEVVSEALPMLSECYQHLQQPQAWANFLKRCVEDNTGAAAELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFYR
LMDYHLADAEEGRAKESLLLLRDMVGEQIRTKPRYRCHKCGFTAHSLYWHCPSCRAWASVKPIRGLDGQ

Sequences:

>Translated_389_residues
MLEMLFLLLPVAAAYGWYMGRRSAQQDKQQDANRLSREYVAGVNFLLSNQQDKAVDLFLEMLKEDSSTVEAHLTLGNLFR
SRGEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLGALQQLLIIHQATSDWHNA
IEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGLLKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERV
LEQDKEVVSEALPMLSECYQHLQQPQAWANFLKRCVEDNTGAAAELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFYR
LMDYHLADAEEGRAKESLLLLRDMVGEQIRTKPRYRCHKCGFTAHSLYWHCPSCRAWASVKPIRGLDGQ
>Mature_389_residues
MLEMLFLLLPVAAAYGWYMGRRSAQQDKQQDANRLSREYVAGVNFLLSNQQDKAVDLFLEMLKEDSSTVEAHLTLGNLFR
SRGEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLGALQQLLIIHQATSDWHNA
IEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGLLKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERV
LEQDKEVVSEALPMLSECYQHLQQPQAWANFLKRCVEDNTGAAAELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFYR
LMDYHLADAEEGRAKESLLLLRDMVGEQIRTKPRYRCHKCGFTAHSLYWHCPSCRAWASVKPIRGLDGQ

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=77.8364116094987, Blast_Score=634, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44406; Mature: 44406

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCHHHHHEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]