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The map label for this gene is ssuC [C]

Identifier: 170024194

GI number: 170024194

Start: 2176083

End: 2176904

Strand: Reverse

Name: ssuC [C]

Synonym: YPK_1957

Alternate gene names: 170024194

Gene position: 2176904-2176083 (Counterclockwise)

Preceding gene: 170024195

Following gene: 170024193

Centisome position: 46.42

GC content: 45.38

Gene sequence:

>822_bases
ATGAAAAATATTAAGGTTTATCAATATATCAAGTGGGTCATTATGCCAACTATTGTGCTGTTAATGTGGCAAATGCTCGC
AATATCGGGCTGGATACAACCCACAATACTTCCATCACCAGTAGCCGTTGTGGTGCGCTGGTTCGATTATTTTTTACCCT
ATGAAGCCTATAACCCAGAAACATCAAACTGGCTGATGTGGAGTCTTTCAGGGGAGTTACTGCATGATGCCTGGGCGAGT
ATCTACCGCGTAATTATTGGTTTTCTAATCGGTGCTCTTCTTGCTCTACCATTAGGATTATGGGTGGGTTCCAGTAAAAT
TGGCAATGACCTAATGAACCCTTTAATTCAGTTTCTTCGCCCCATTCCGCCAATTGCATATATTCCATTAGCGATGCTGT
GGTTCGGCCTGGGGAATCCGCCGGCATTTTTTTTGATAAGTATAGGGGCTTTTTTCCCAATACTGATTAATACCATCGCG
GGGGTCCGTAATGTGGATGGCATATATATCCTGGCTGCACGCAATCTAGGCGCAGGTCAAGCCACGATGTTTCGCCGAAT
TATTCTTCCGGCGGCCACTCCTTATATTCTTACAGGGATGCGAGTTGGTATAGGGACCGCGTTTATTTGCGTGATTGTGG
CAGAAATGATCGCCGTTAATAGCGGTGTTGGCTACCGAATTCTGGAAGCGCGCGAATATATGTGGTCCGATAAAGTAATA
GCAGGCATGTTCACAATTGGTTTTCTTGGCCTGGTCATTGATTTATGCATGGATCGCCTGAATCGGCGTCTTTTACGCTG
GCACAGAGGAATAGGCAACTGA

Upstream 100 bases:

>100_bases
CATCGGCCGAATGAATAATCCCCCCGTTGCCGCTGATTGGGTAAAGACTGATCTTCTTGAGGCTGCAAAGAAAAGCATTG
GGGTTAATGGGTCATAACTG

Downstream 100 bases:

>100_bases
GATACCCATATGAAAATATCAGATAATATTATTGAACAAGTAGAGACGTGTGAAATTAGTATTAATCATGTTGATAAGTC
ATTTAGCTCTGGGGAGAGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKNIKVYQYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPETSNWLMWSLSGELLHDAWAS
IYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAMLWFGLGNPPAFFLISIGAFFPILINTIA
GVRNVDGIYILAARNLGAGQATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVI
AGMFTIGFLGLVIDLCMDRLNRRLLRWHRGIGN

Sequences:

>Translated_273_residues
MKNIKVYQYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPETSNWLMWSLSGELLHDAWAS
IYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAMLWFGLGNPPAFFLISIGAFFPILINTIA
GVRNVDGIYILAARNLGAGQATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVI
AGMFTIGFLGLVIDLCMDRLNRRLLRWHRGIGN
>Mature_273_residues
MKNIKVYQYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPETSNWLMWSLSGELLHDAWAS
IYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAMLWFGLGNPPAFFLISIGAFFPILINTIA
GVRNVDGIYILAARNLGAGQATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVI
AGMFTIGFLGLVIDLCMDRLNRRLLRWHRGIGN

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=254, Percent_Identity=38.1889763779528, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1786564, Length=251, Percent_Identity=33.0677290836653, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1789033, Length=183, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30650; Mature: 30650

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKVYQYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
TSNWLMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLR
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PIPPIAYIPLAMLWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGMFTIGFLGLVIDLCMDRLNRRLLRWHRGIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNIKVYQYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
TSNWLMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLR
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PIPPIAYIPLAMLWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGMFTIGFLGLVIDLCMDRLNRRLLRWHRGIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA