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The map label for this gene is 170024190

Identifier: 170024190

GI number: 170024190

Start: 2170425

End: 2171576

Strand: Reverse

Name: 170024190

Synonym: YPK_1953

Alternate gene names: NA

Gene position: 2171576-2170425 (Counterclockwise)

Preceding gene: 170024191

Following gene: 170024189

Centisome position: 46.31

GC content: 47.05

Gene sequence:

>1152_bases
ATGTTGGCGACGATCACTGATTATAAACAGAAAATTACACTCATTCAGGATAGTGGGATCCAGTTCCTGGATTTTGCTTT
AACGCCAGAATCAGACACTGAGCTACCCAATAAATTTGTCCGTAAAAGTGCCAATGGCCCGTTGTTACGCCTGAATTACC
ATGAACACAATGGTAAATATTCACTGATGCTCCCAGGGGCAGCCCCTGAGATTGTGAAACCTGAATTTAGTATTCCACTA
GAGCAATCACTGAAGTTATTGAACCAGATTTGGCTACCTTTGCCGTTTTTGCGATTTACCCCACCCCACACCTTTATTCG
TGGGCCAGATAATTGGGCCCGAGTACAAATATTAACGCTGGACACGCCAGATCAAGATGGCAATACGTTACGTGTCACGT
TGGCTTTTGATACCAAAGTGTATCCTGAAAGCCACGATAACGACTATTTGGCCCCCACTGAAAACGATATCAAAACCGGC
CTGAGTTTCGCACTGGCTTACCATAATGAAGATCTGGCCGAGTTTCTGGATTTGACGTGGGTCGATGGCTGGCTGCGGGA
CGTGTTTACCCAACAAGCTGCCGAGCAAGAAGAACGAACCGCCAGACATATTAGCGCCTCGCTCAGAGAGTTTGAATATC
AAGCACATTATCTGAATGTGCTGGCGTTACTTGGCAGTCAGCTCCGTATACCGGAAATCAAAATCACCACGAATACGCTG
CAAGAACCTGCGGTTAACGTGGATTTAATCCTTGATGTGGGTAACTCACATACCTGCGGCATTTTGGTTGAAGACCATGC
CGATGAAAGTTATGGGCTAAACCAGACTTATGAGCTGCAATTGCGCGATCTGAGTGAACCTCACTACCTGTATAACGCGT
TATTTGAAAGCCGGGTGGAGTTCGCGCAAGCAAAATTTGGTCAGCAGAGTTTTTCAGTTGAAAGTGGCCGTGAAGATGCT
TTTATCTGGCCTTCGATTACCCGTGTTGGCCACGAAGCCTGCCGTATGGCATTACAGCGCTTGGGCACCGAAGGTTCGAC
CGGTATTTCCAGCCCACGACGTCTTACTCAGCGAAGTAGATATCGCCAAAATAATCACCCGTGCTTTCTTGCTGGATTGC
CCTCAGGAAAATCCAGCTTATTCGTTGGATGA

Upstream 100 bases:

>100_bases
GTCTGTAAACAAGGCACCACAGATATTGCCGATTGCAAAGGCCGCTATGATGCCAATACGACCCTTTCAATGACGATGAC
GCGTGAGAGTAAATAATATT

Downstream 100 bases:

>100_bases
GCAACAGATTACCGAACATCTACGGCAGTTGATGATGCACAGGCGGCCAATCATTAACGCTGGAATCAATAGCGATGATG
TGATTGCACTTTGGGACTCC

Product: putative virulence factor SrfB

Products: NA

Alternate protein names: Virulence Effector Protein; Virulence Factor SrfB-Like Protein; Virulence Factor; Virulence Factor SrfB; SrfB Superfamily Virulence Factor; Protein Conserved In Bacteria Virulence Factor; SsrAB Activated Protein

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLATITDYKQKITLIQDSGIQFLDFALTPESDTELPNKFVRKSANGPLLRLNYHEHNGKYSLMLPGAAPEIVKPEFSIPL
EQSLKLLNQIWLPLPFLRFTPPHTFIRGPDNWARVQILTLDTPDQDGNTLRVTLAFDTKVYPESHDNDYLAPTENDIKTG
LSFALAYHNEDLAEFLDLTWVDGWLRDVFTQQAAEQEERTARHISASLREFEYQAHYLNVLALLGSQLRIPEIKITTNTL
QEPAVNVDLILDVGNSHTCGILVEDHADESYGLNQTYELQLRDLSEPHYLYNALFESRVEFAQAKFGQQSFSVESGREDA
FIWPSITRVGHEACRMALQRLGTEGSTGISSPRRLTQRSRYRQNNHPCFLAGLPSGKSSLFVG

Sequences:

>Translated_383_residues
MLATITDYKQKITLIQDSGIQFLDFALTPESDTELPNKFVRKSANGPLLRLNYHEHNGKYSLMLPGAAPEIVKPEFSIPL
EQSLKLLNQIWLPLPFLRFTPPHTFIRGPDNWARVQILTLDTPDQDGNTLRVTLAFDTKVYPESHDNDYLAPTENDIKTG
LSFALAYHNEDLAEFLDLTWVDGWLRDVFTQQAAEQEERTARHISASLREFEYQAHYLNVLALLGSQLRIPEIKITTNTL
QEPAVNVDLILDVGNSHTCGILVEDHADESYGLNQTYELQLRDLSEPHYLYNALFESRVEFAQAKFGQQSFSVESGREDA
FIWPSITRVGHEACRMALQRLGTEGSTGISSPRRLTQRSRYRQNNHPCFLAGLPSGKSSLFVG
>Mature_383_residues
MLATITDYKQKITLIQDSGIQFLDFALTPESDTELPNKFVRKSANGPLLRLNYHEHNGKYSLMLPGAAPEIVKPEFSIPL
EQSLKLLNQIWLPLPFLRFTPPHTFIRGPDNWARVQILTLDTPDQDGNTLRVTLAFDTKVYPESHDNDYLAPTENDIKTG
LSFALAYHNEDLAEFLDLTWVDGWLRDVFTQQAAEQEERTARHISASLREFEYQAHYLNVLALLGSQLRIPEIKITTNTL
QEPAVNVDLILDVGNSHTCGILVEDHADESYGLNQTYELQLRDLSEPHYLYNALFESRVEFAQAKFGQQSFSVESGREDA
FIWPSITRVGHEACRMALQRLGTEGSTGISSPRRLTQRSRYRQNNHPCFLAGLPSGKSSLFVG

Specific function: Unknown

COG id: COG4457

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43422; Mature: 43422

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATITDYKQKITLIQDSGIQFLDFALTPESDTELPNKFVRKSANGPLLRLNYHEHNGKY
CCCCCCCCHHEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEE
SLMLPGAAPEIVKPEFSIPLEQSLKLLNQIWLPLPFLRFTPPHTFIRGPDNWARVQILTL
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCEEEEEEEE
DTPDQDGNTLRVTLAFDTKVYPESHDNDYLAPTENDIKTGLSFALAYHNEDLAEFLDLTW
CCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHH
VDGWLRDVFTQQAAEQEERTARHISASLREFEYQAHYLNVLALLGSQLRIPEIKITTNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
QEPAVNVDLILDVGNSHTCGILVEDHADESYGLNQTYELQLRDLSEPHYLYNALFESRVE
CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
FAQAKFGQQSFSVESGREDAFIWPSITRVGHEACRMALQRLGTEGSTGISSPRRLTQRSR
HHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
YRQNNHPCFLAGLPSGKSSLFVG
HHCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLATITDYKQKITLIQDSGIQFLDFALTPESDTELPNKFVRKSANGPLLRLNYHEHNGKY
CCCCCCCCHHEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEE
SLMLPGAAPEIVKPEFSIPLEQSLKLLNQIWLPLPFLRFTPPHTFIRGPDNWARVQILTL
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCEEEEEEEE
DTPDQDGNTLRVTLAFDTKVYPESHDNDYLAPTENDIKTGLSFALAYHNEDLAEFLDLTW
CCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHH
VDGWLRDVFTQQAAEQEERTARHISASLREFEYQAHYLNVLALLGSQLRIPEIKITTNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
QEPAVNVDLILDVGNSHTCGILVEDHADESYGLNQTYELQLRDLSEPHYLYNALFESRVE
CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
FAQAKFGQQSFSVESGREDAFIWPSITRVGHEACRMALQRLGTEGSTGISSPRRLTQRSR
HHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
YRQNNHPCFLAGLPSGKSSLFVG
HHCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA