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The map label for this gene is yohC [H]

Identifier: 170024124

GI number: 170024124

Start: 2090100

End: 2090690

Strand: Reverse

Name: yohC [H]

Synonym: YPK_1885

Alternate gene names: 170024124

Gene position: 2090690-2090100 (Counterclockwise)

Preceding gene: 170024125

Following gene: 170024123

Centisome position: 44.58

GC content: 50.25

Gene sequence:

>591_bases
ATGGTCAACCATGTTTGGGGACTTCTGACGCATCCCCGTCAGGAATTGCAACAGATCAAACGTGAAGGTGAGAGTATCCC
GCATCTCTATACTCACCATGTCCTGCTTCTTGCGGCCATTCCGGTTATTTGCGCGTTTATCGGTACCACTCAAGTGGGTT
GGCGCTTTGGCAACGGTCAGGCTATCAAGCTGGATACACTTACTGCGCTCTACTCTGCGGTTATTTTCTACACCCTGATA
CTGGCGGCAGTCGCCCTTATGGGGCAGGTCATTTACCGGTTGGCTCGCCGCTATGCCAGCCGCCCCAGTTGGCAACGTTG
TACTCTGTTCGCGGGTTATGCTGCAACGCCAATGTTCCTTAGCGGAATTGTCGCCCTTTACCCTCTAGTCTGGTTATGCT
TATTTGCCGGGATTATCGCTCTTTGTTATTCCGCTTATCTGATGTATCTGGGGATACCCACATTTCTGGATATTGATCGA
CAAGAAGGATTTATTTTTTCCAGTTCGACGCTGGCCATCGGGGTACTGGTACTGGAACTCCTTCTTGGATTGACTGTGTT
GCTATGGGGCTATGGCTCGCGATTAATTTGA

Upstream 100 bases:

>100_bases
ATACTAATATCAGTACCGTCCCATAGGAAACGGTATTTATATGATATGGACAATAAAATCAGTCCGTTACCTGCACTGCT
AGCGGGCAAGGAGGTGTTTT

Downstream 100 bases:

>100_bases
AATGTGCGCTGAATGCTGCGATGTGCTGAATACCATTGTGATAAATGCTATTGCGATAAATACCATTGTGATAAATACCA
TGCCCCTGCTAGCGGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MVNHVWGLLTHPRQELQQIKREGESIPHLYTHHVLLLAAIPVICAFIGTTQVGWRFGNGQAIKLDTLTALYSAVIFYTLI
LAAVALMGQVIYRLARRYASRPSWQRCTLFAGYAATPMFLSGIVALYPLVWLCLFAGIIALCYSAYLMYLGIPTFLDIDR
QEGFIFSSSTLAIGVLVLELLLGLTVLLWGYGSRLI

Sequences:

>Translated_196_residues
MVNHVWGLLTHPRQELQQIKREGESIPHLYTHHVLLLAAIPVICAFIGTTQVGWRFGNGQAIKLDTLTALYSAVIFYTLI
LAAVALMGQVIYRLARRYASRPSWQRCTLFAGYAATPMFLSGIVALYPLVWLCLFAGIIALCYSAYLMYLGIPTFLDIDR
QEGFIFSSSTLAIGVLVLELLLGLTVLLWGYGSRLI
>Mature_196_residues
MVNHVWGLLTHPRQELQQIKREGESIPHLYTHHVLLLAAIPVICAFIGTTQVGWRFGNGQAIKLDTLTALYSAVIFYTLI
LAAVALMGQVIYRLARRYASRPSWQRCTLFAGYAATPMFLSGIVALYPLVWLCLFAGIIALCYSAYLMYLGIPTFLDIDR
QEGFIFSSSTLAIGVLVLELLLGLTVLLWGYGSRLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=194, Percent_Identity=65.4639175257732, Blast_Score=246, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 21841; Mature: 21841

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNHVWGLLTHPRQELQQIKREGESIPHLYTHHVLLLAAIPVICAFIGTTQVGWRFGNGQ
CCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCEEECCCC
AIKLDTLTALYSAVIFYTLILAAVALMGQVIYRLARRYASRPSWQRCTLFAGYAATPMFL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHH
SGIVALYPLVWLCLFAGIIALCYSAYLMYLGIPTFLDIDRQEGFIFSSSTLAIGVLVLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHHHHH
LLGLTVLLWGYGSRLI
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVNHVWGLLTHPRQELQQIKREGESIPHLYTHHVLLLAAIPVICAFIGTTQVGWRFGNGQ
CCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCEEECCCC
AIKLDTLTALYSAVIFYTLILAAVALMGQVIYRLARRYASRPSWQRCTLFAGYAATPMFL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHH
SGIVALYPLVWLCLFAGIIALCYSAYLMYLGIPTFLDIDRQEGFIFSSSTLAIGVLVLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHHHHH
LLGLTVLLWGYGSRLI
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]