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The map label for this gene is yniC [H]

Identifier: 170024047

GI number: 170024047

Start: 2008509

End: 2009174

Strand: Reverse

Name: yniC [H]

Synonym: YPK_1808

Alternate gene names: 170024047

Gene position: 2009174-2008509 (Counterclockwise)

Preceding gene: 170024050

Following gene: 170024046

Centisome position: 42.84

GC content: 49.7

Gene sequence:

>666_bases
ATGGCGACCGCTCATCCAATTAAAGCCGCAATTTTTGATATGGACGGCTTGTTGATTGACTCTGAGCCTTTATGGCTGCA
GGCCGAACTGGATATTTTCACCGCCCTGGGCTTGGATACATCCTCTCGAGATTCCCTGCCAGATACTCTTGGCCTGCGTA
TCGATTTAGTGGTTAAGCTTTGGTATCAAACAATGCCTTGGCAGGGGCCGAGCCAAGAGGAGGTTTGCAATCGTATCATT
GCCAGAGCAATTGATTTAGTTGAAGATACACGGCCTGTTTTACCTGGCGTTGAATATGCATTAGCGCTTTGCCGCCAACA
AGGGCTGAAAATTGGTCTGGCGTCAGCCTCCCCGCTACACATGCAGGAGCGGGTGCTCGCAATGCTAGGCGTTGAAAAGT
ACTTCGATTGCTTGGTTTCCGCTGAATACCTCCCCTACAGCAAGCCGCATCCAGAAGTTTATCTGAATGCCGCCGCTCAG
CTTGATGTTGATCCATTACAATGTGTCACGCTGGAAGATTCAGTAAACGGTATGATAGCGACCAAAGCGGCACGTATGCG
CTCTATTGTCATCCCATCAGTTGAGTACCGCGCAGATCCACGCTGGGCATTGGCCGATATTCAATTGGAATCATTAGATC
AATTGCGCAAGGACGACATCTCGTAG

Upstream 100 bases:

>100_bases
CTTAAGCCACGATAAAGAGTCATGTTCAACCCGAACAACCGTTATGAATCAATGATAAAGTGATCAACTCATAACTAAAC
ACTGACAGGAGTGATGATAA

Downstream 100 bases:

>100_bases
TGTATGTATATGATATGGAAATAAGCGTTTTTAGTGACAAATGTAGATAGTGACAAAGGTAAATAGTGACAAAGGTAAAT
AGTGACAAAGGTAAATAGCG

Product: 2-deoxyglucose-6-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MATAHPIKAAIFDMDGLLIDSEPLWLQAELDIFTALGLDTSSRDSLPDTLGLRIDLVVKLWYQTMPWQGPSQEEVCNRII
ARAIDLVEDTRPVLPGVEYALALCRQQGLKIGLASASPLHMQERVLAMLGVEKYFDCLVSAEYLPYSKPHPEVYLNAAAQ
LDVDPLQCVTLEDSVNGMIATKAARMRSIVIPSVEYRADPRWALADIQLESLDQLRKDDIS

Sequences:

>Translated_221_residues
MATAHPIKAAIFDMDGLLIDSEPLWLQAELDIFTALGLDTSSRDSLPDTLGLRIDLVVKLWYQTMPWQGPSQEEVCNRII
ARAIDLVEDTRPVLPGVEYALALCRQQGLKIGLASASPLHMQERVLAMLGVEKYFDCLVSAEYLPYSKPHPEVYLNAAAQ
LDVDPLQCVTLEDSVNGMIATKAARMRSIVIPSVEYRADPRWALADIQLESLDQLRKDDIS
>Mature_220_residues
ATAHPIKAAIFDMDGLLIDSEPLWLQAELDIFTALGLDTSSRDSLPDTLGLRIDLVVKLWYQTMPWQGPSQEEVCNRIIA
RAIDLVEDTRPVLPGVEYALALCRQQGLKIGLASASPLHMQERVLAMLGVEKYFDCLVSAEYLPYSKPHPEVYLNAAAQL
DVDPLQCVTLEDSVNGMIATKAARMRSIVIPSVEYRADPRWALADIQLESLDQLRKDDIS

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=220, Percent_Identity=66.3636363636364, Blast_Score=302, Evalue=1e-83,
Organism=Escherichia coli, GI1787576, Length=193, Percent_Identity=31.6062176165803, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789787, Length=208, Percent_Identity=25.9615384615385, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24593; Mature: 24461

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAHPIKAAIFDMDGLLIDSEPLWLQAELDIFTALGLDTSSRDSLPDTLGLRIDLVVKL
CCCCCCHHHEEECCCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHCHHHHHHHHH
WYQTMPWQGPSQEEVCNRIIARAIDLVEDTRPVLPGVEYALALCRQQGLKIGLASASPLH
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHH
MQERVLAMLGVEKYFDCLVSAEYLPYSKPHPEVYLNAAAQLDVDPLQCVTLEDSVNGMIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHH
TKAARMRSIVIPSVEYRADPRWALADIQLESLDQLRKDDIS
HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ATAHPIKAAIFDMDGLLIDSEPLWLQAELDIFTALGLDTSSRDSLPDTLGLRIDLVVKL
CCCCCHHHEEECCCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHCHHHHHHHHH
WYQTMPWQGPSQEEVCNRIIARAIDLVEDTRPVLPGVEYALALCRQQGLKIGLASASPLH
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHH
MQERVLAMLGVEKYFDCLVSAEYLPYSKPHPEVYLNAAAQLDVDPLQCVTLEDSVNGMIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHH
TKAARMRSIVIPSVEYRADPRWALADIQLESLDQLRKDDIS
HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]