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The map label for this gene is yebS [H]

Identifier: 170024019

GI number: 170024019

Start: 1976049

End: 1977401

Strand: Reverse

Name: yebS [H]

Synonym: YPK_1780

Alternate gene names: 170024019

Gene position: 1977401-1976049 (Counterclockwise)

Preceding gene: 170024024

Following gene: 170024018

Centisome position: 42.17

GC content: 50.04

Gene sequence:

>1353_bases
ATGAATTCACCTGTTTCGCCCGATTACGCCATCATGAACCGTGCTATTTTTTACAAAACGATACGATATACTGATGACAT
CCTATGTAGAGCTACCCTCTATCCCATGAAAATACACGCAATTCAACGCCCATTATCCACCGCTCGAGCCCAACGATGCT
GCGAGTGCGATGCCCTATTCACCTTGCCACCATTGGGGGGCAACCAAACAGCCTATTGCCCACGCTGCAACGCCCAAATA
ACCAGTGGGCGTGACTGGTCGCTGACCCGGTTGACCGCCATGGCTTGCGCCATGTTGCTGTTAATACCGTTCGCCTTCAC
TGAACCCCTGATCAGTATTCGCTTACTTGGCACACGTATTGATGCCAGTCTGTTAGCCGGGATTTGGCAAATGAGCCGTC
AAGGCGACCCCATCACAGCCAGCATGGTGGCATTTTGTGTCCTCGCGGCACCGGTAACCTTAACCTTCTCTATTCTATAT
CTGCGTATTGGTAGCCGGATTGGCATAAATCTGCGCCCGATACTGCTTATATTGGAGCGACTGAAAGAGTGGGTCATGCT
GGATATCTATTTAATCGGCATGGCCGTCGCCTGCATTAAAGTCAAAGAATACGCTGACATCATGCCGGGTACAGGTCTGA
TAGCCTACCTGGCCTTGACATTACTGAGTATTCTGACCTTGGTTCATCTGAATCTGGAGCAACTTTGGGAACGGTTTTAT
CCGCAAGAACAGCCTCCAGGCCCGCAGGAAACACTGCGCGTTTGCTTATCGTGCCACTACACTGGACACCCCGATAGCCA
TGGCCGTTGTCCGCGTTGCCATACACCTCTCCGACACCGCCGGCGTCATAGCCTACAGAAAACCTGGGCCGCATTGATTG
CCGCTATCGTTTTGTTATTGCCCGCCAACCTACTCCCAATATCAATCGTTTATGCCAACGGCGCACGGATAGAGGATACC
ATTTTCTCCGGTGTGGTTTCTTTGGCGTCATCGGGTAATTTCCCTATTGCTGCCGTGGTCTTCATCGCCAGTGTATTGGT
GCCGTTTACTAAAGTGATCGTGTTAATCACGTTGCTGCTCAGTATTCACCTAAAGACACAACACAGCCTGAAAACCCGGA
TGCGTTTGCTGCGGTTGATCACCTGGATTGGTCGCTGGTCAATGCTGGATCTCTTTGTTATCGCATTAATGATGTCGCTA
ATTAATCGCGATCAGCTTTTTTCCTTCACTATGGGGCCAGCAGCCTTCTATTTTGGGTCTGCGGTTATTTTGACTATTCT
TGCTGTTGAGTGGCTAGATAGCCGATTGATTTGGGATGCATATGCAACAGGAAACACCGAGTACACCGACTGA

Upstream 100 bases:

>100_bases
AGCCAAGGGCAATGAATGCTTGGCTTATATAAAATAATCATTAAATACCCTTGGCGACAAGGGTATTCCTCTGTAATGTT
GCAAAAGAGTTACCTATGTT

Downstream 100 bases:

>100_bases
GGCTCATGTAAAACATAAACGCCGGTTCTCCCCCTTCTGGCTACTGCCTTTTATTGCGCTACTGATCACGGGCTGGCTGA
TTTATAACAATTGGCAAGAA

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNSPVSPDYAIMNRAIFYKTIRYTDDILCRATLYPMKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQI
TSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILY
LRIGSRIGINLRPILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFY
PQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHTPLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDT
IFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSL
INRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSRLIWDAYATGNTEYTD

Sequences:

>Translated_450_residues
MNSPVSPDYAIMNRAIFYKTIRYTDDILCRATLYPMKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQI
TSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILY
LRIGSRIGINLRPILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFY
PQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHTPLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDT
IFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSL
INRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSRLIWDAYATGNTEYTD
>Mature_450_residues
MNSPVSPDYAIMNRAIFYKTIRYTDDILCRATLYPMKIHAIQRPLSTARAQRCCECDALFTLPPLGGNQTAYCPRCNAQI
TSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILY
LRIGSRIGINLRPILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFY
PQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHTPLRHRRRHSLQKTWAALIAAIVLLLPANLLPISIVYANGARIEDT
IFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLLSIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSL
INRDQLFSFTMGPAAFYFGSAVILTILAVEWLDSRLIWDAYATGNTEYTD

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=415, Percent_Identity=66.7469879518072, Blast_Score=582, Evalue=1e-167,
Organism=Escherichia coli, GI1787183, Length=406, Percent_Identity=30.7881773399015, Blast_Score=175, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 50398; Mature: 50398

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPVSPDYAIMNRAIFYKTIRYTDDILCRATLYPMKIHAIQRPLSTARAQRCCECDALF
CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRLLGTRI
ECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRIGSRIGINLRPILLILER
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
PQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHTPLRHRRRHSLQKTWAALIAAIVLLL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PANLLPISIVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLL
CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHEEECCHHHHHHHH
AVILTILAVEWLDSRLIWDAYATGNTEYTD
HHHHHHHHHHHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MNSPVSPDYAIMNRAIFYKTIRYTDDILCRATLYPMKIHAIQRPLSTARAQRCCECDALF
CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLISIRLLGTRI
ECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRIGSRIGINLRPILLILER
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLALTLLSILTLVHLNLEQLWERFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
PQEQPPGPQETLRVCLSCHYTGHPDSHGRCPRCHTPLRHRRRHSLQKTWAALIAAIVLLL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PANLLPISIVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLL
CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIHLKTQHSLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHEEECCHHHHHHHH
AVILTILAVEWLDSRLIWDAYATGNTEYTD
HHHHHHHHHHHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]