| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is yebV [H]
Identifier: 170024011
GI number: 170024011
Start: 1966326
End: 1966565
Strand: Reverse
Name: yebV [H]
Synonym: YPK_1772
Alternate gene names: 170024011
Gene position: 1966565-1966326 (Counterclockwise)
Preceding gene: 170024012
Following gene: 170024004
Centisome position: 41.94
GC content: 40.42
Gene sequence:
>240_bases ATGGGGAAAAGCATCGTAAAAATCAGGCAGTTTGAAGTTGATGATGCAGAATTATCATCACAGACAAAAGGTGAGCATAT GCTCAGTATTCCATGTAAATCAGACCCTGATTTATGTATGCAGCTAGATGGATGGGATGAAAACACCAGTATTCCTGCTA TCTTGGATGGCAAGGATACGCTGTTATACAAGCAACATTACGATCAACATCAAGATGCCTGGGTTATGAAGGTAACCTGA
Upstream 100 bases:
>100_bases TTTTAGAGAATACCTCTGGCGATTTTCTTCAGCTCAGCTATTCTCAATAAGGCTGTCAATCTGGTCATACCTCCTGCCAC ACTATTAGTAAGGAGCCTTT
Downstream 100 bases:
>100_bases ACATGGCGATAAGAAGATCCGTCAACCCATAGTTCATGCTTATGAGTGACGGTTTCTTCTCTTGGAACGTAGCGAAGCTA ACGGACTAAAACAACGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGKSIVKIRQFEVDDAELSSQTKGEHMLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT
Sequences:
>Translated_79_residues MGKSIVKIRQFEVDDAELSSQTKGEHMLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT >Mature_78_residues GKSIVKIRQFEVDDAELSSQTKGEHMLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDTLLYKQHYDQHQDAWVMKVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081986, Length=77, Percent_Identity=55.8441558441558, Blast_Score=104, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009950 - ProDom: PD060427 [H]
Pfam domain/function: PF07351 DUF1480 [H]
EC number: NA
Molecular weight: Translated: 9024; Mature: 8893
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSIVKIRQFEVDDAELSSQTKGEHMLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDT CCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCE LLYKQHYDQHQDAWVMKVT EEECCCCCCCCCEEEEEEC >Mature Secondary Structure GKSIVKIRQFEVDDAELSSQTKGEHMLSIPCKSDPDLCMQLDGWDENTSIPAILDGKDT CCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCE LLYKQHYDQHQDAWVMKVT EEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]