Click here to switch to the map view.

The map label for this gene is trg [H]

Identifier: 170023983

GI number: 170023983

Start: 1929098

End: 1930837

Strand: Reverse

Name: trg [H]

Synonym: YPK_1742

Alternate gene names: 170023983

Gene position: 1930837-1929098 (Counterclockwise)

Preceding gene: 170024003

Following gene: 170023980

Centisome position: 41.17

GC content: 48.05

Gene sequence:

>1740_bases
ATGAAACGTGGAAGTGCGCACAAGCCATTGGATATGAAAATAGCACCAGAGCCGAATAAAGATACCAAAGTGTCCTTTAT
CAATAATATGCGTCTGGTCACTTTGTTTATCGTCATATTGGCGGGAATATTGCTTTTATTTGCCGCCGCTATTGGGACAT
CGGGCTACTTTTTAAAACAAAGTAACCAATCTTTGGCGCAAGCGACGCAAGAGATCGACATCCGTCAGGGTCTGTCTAAC
AGCTCTAATCATCTACGAACCGCCCGTCTTATTCTGATCCAGGCCGCCTCCTCCGCACGTATTGGTGATGCTACAGGCTA
TCAGCAAGGCCTAAAAAATGCAGAAGGCCGCATAGCTCAGTCACAGCAAATGTTCGACCTCTATTATAACCGGCCAACAA
AATCTGAAACGGACATGGCGCTGGATGTACCACTGAAAAAAGCCTACGAACAATATCGTGACGATGGGATGAAACCCATG
TTAGCGGCAACGAAAGAGGGCCACTTTGAAGAGGTTATCTCTCTTGATGCTGAGAAAATCAGTCTGCTAGACGACGGCTA
TAACGAACCACTGCTGAAAGCCGTTAAATATCGTACAGAGCAAGCGAACCAGATTAACCAGTCCGCTCACCAAGAAGCGC
GCCTTGGTTACATTCTCATGGCGGGGGCTTTTGTCTTGGTTATCTTATTGACAATAATTGCTTTCTTAGTCATCAGTAAG
GTAATCATCAATCCAATTAATTGGTTGGTCACCCGTATTCAGCGGATTGCCCAGGGGGATTTGACGCAATCTCCCGTCTC
ATTTGGCCGTAATGAAATTGGCGTACTGGGAAGTAATATCCAGCAAATGCAGGATGCATTAGCCATCACAGTTGAAGCGG
TGCGCAGCAGTGCTGAATCTATCTATCAAGGATCCAGCGAAATCGCCTTGGGGAATACTGACCTTTCAGCACGCACAGAG
CAGCAAGCCGCTTCACTTGAACAAACTGCGGCCAGCATGGAGCAACTGACCGCAACCGTGAAACAGAATGCTGAAAACGC
CCATCACGCGAGCCAACTGGCCGCGAATGCATCGGGTAAAGCAGCTCAAGGTGGTGATATTGTCAGTGATGTTGTCAGCA
CCATGGATAAAATATCTCTCAGCTCCATGAAAATTGCTGAAATAACGAATGTTATTAATAGCATTGCGTTCCAAACTAAT
ATTTTGGCACTGAACGCGGCGGTAGAAGCCGCGCGCGCGGGCGAACAAGGGCGCGGTTTTGCTGTAGTGGCCAGTGAAGT
ACGCCACCTGGCGCAGCGCAGCGCAGATGCCGCAAAAGAAATTGAGTCGCTGATTGAAGCCTCAGTTGATTTAATTGGTG
ACGGTTCAATTCTGGTTTCAAATGCGGGTAAAACAATGAACGAGATTGTCACAGCAGTCACTCACGTCACTGATATCATG
GGTGAAATTGCATCAGCTTCCGATGAGCAAAGCCGCGGCATCAGCCAGGTTGCGCAAGCCGTATCTGAAATGGATAACGT
TACTCAGCAGAACGCCTCTTTAGTGCAGGAAGCCTCTGCAGCGGCAGCCTCTCTGGAGCAACAAGCTGAAATATTGACTC
AAGCGGTCGCGGTCTTCCAGCTTGCGGGTCACTCGTCTATCAAGGAATTTAAAAGCCCTGTCTCCCCTCCTACAGGCCAA
AATGGTTCTGGCATCAATAAGAAGCCAACGGATGGTTCACTGAATTGGGAAACTTTCTAA

Upstream 100 bases:

>100_bases
GCAATGTTGGGATAATTTCAGATATCTCCCCTAAATAATTCGTAGCGATGCCTATTAGGCAAGGCCCCTCCCTCAAGCAA
CTATAAAAACGGAACTAAAA

Downstream 100 bases:

>100_bases
GCAAGCAATCTTTGTTGGCCATTTCAGATGCAGCTTATTCATCTAAGTGATGCCGGGAAGTGAGTGGCCGCTTAAAATAC
CAGGGAAGATAAAAAGCAAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDMALDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTIIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF

Sequences:

>Translated_579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDMALDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTIIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF
>Mature_579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDMALDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTIIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=539, Percent_Identity=58.0705009276438, Blast_Score=578, Evalue=1e-166,
Organism=Escherichia coli, GI1788195, Length=342, Percent_Identity=60.233918128655, Blast_Score=354, Evalue=1e-98,
Organism=Escherichia coli, GI2367378, Length=487, Percent_Identity=47.4332648870637, Blast_Score=349, Evalue=3e-97,
Organism=Escherichia coli, GI1788194, Length=555, Percent_Identity=41.981981981982, Blast_Score=332, Evalue=4e-92,
Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=41.0094637223975, Blast_Score=224, Evalue=9e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61927; Mature: 61927

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQ
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SNQSLAQATQEIDIRQGLSNSSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCCCHHHH
SQQMFDLYYNRPTKSETDMALDVPLKKAYEQYRDDGMKPMLAATKEGHFEEVISLDAEKI
HHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHH
SLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTIIAFLVISK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAES
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IYQGSSEIALGNTDLSARTEQQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGK
HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQ
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHSSIKEFKSPVSPPTGQNGSGINKKPTDGSLNWETF
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQ
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SNQSLAQATQEIDIRQGLSNSSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCCCHHHH
SQQMFDLYYNRPTKSETDMALDVPLKKAYEQYRDDGMKPMLAATKEGHFEEVISLDAEKI
HHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHH
SLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTIIAFLVISK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAES
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IYQGSSEIALGNTDLSARTEQQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGK
HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQ
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHSSIKEFKSPVSPPTGQNGSGINKKPTDGSLNWETF
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]