| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is qorA [H]
Identifier: 170023978
GI number: 170023978
Start: 1923139
End: 1924149
Strand: Reverse
Name: qorA [H]
Synonym: YPK_1737
Alternate gene names: 170023978
Gene position: 1924149-1923139 (Counterclockwise)
Preceding gene: 170023979
Following gene: 170023976
Centisome position: 41.03
GC content: 50.35
Gene sequence:
>1011_bases ATGACATTGTTAACTCATCTCCCTGCAAACATGGTCGCGATTGAAATCACCCAGTTTGGTGGACCAGAGGTATTAGTCCC AGCCAAACGGCCAACCCCCATGCCAGCCGCTGGCGAAATTTTGGTGAAAGTATCTGCCGCTGGAGTGAATCGGCCTGATG TCATGCAACGTCGTGGGCAATATGCGCCCCCACCGGGTGCCTCAGATATTCCCGGATTAGAAGTTGCCGGCGAAGTGGTC GCCATTGCCGCGGATGTCACGCGTTTTAAAATTGGGGACAACGTCTGCGGGCTGATCGCGGGCGGCGGTTATGCGCAGTA CTGTGTCATACATGAAACCAATGCGTTACCGATCCCTCAGGGGCTTAGCGCCATTGAAGCCGCCGCACTTCCTGAAACGT TCTTTACTGTCTGGACCAATTTATTCCAACGTGGTCACTTCACTGCAGGCGAAACCGTACTCATTCATGGCGGTTCTTCA GGCATAGGGACAACAGCTATTTTGCTGAGCAAAGCTTTTGGCGCGGCAACGGTTATTGTGACGGTAGGTTCGGAAGAGAA ACGTCAGGCGTGCCTGAATCTGGGCGCAGATATTGCTATTAATTATCACACTCAGGATTTTGTCGCTGAAACCAAGCGGG CAACCGCCGGTAAAGGGGCAGATGTGATTGTCGATTTAATTGCTGGTGATTATGTCGCACGCAATTATGACGCAGCGGCG ATGAATGGCCGTATTGTTCAGATTGGTACACAAAATGGTCATGCCAAAGACCTTAACCTGATGCTGATGTTAATAAAACG TCTAACACATACCGGCTCCACACTGCGCTCCCGTACAGTTGCAGAGAAAGCATTAATTGCCAACGAACTTGAACAACACG TTTGGCCACTGCTGAGTGAGGGTAAAATGAAACCACAGATTTTCAGTACCTTCCCGCTGGAAGCCGCCGCAAAAGCCCAT GAACTAATGGAAAGCAGTACACACATAGGTAAAATTGTTCTCACCGCTTGA
Upstream 100 bases:
>100_bases ACCCTTTTAGCCATTATCATCTTGAGTCACTACCACTTACTATCATCTTTGGCCACAGCCATCATTGCTGACTCACCGCC ACGCCATTAAGAGGAATATT
Downstream 100 bases:
>100_bases GCCATAAATGCCTATTATCAGCAGTATGCGATACCCAAAATAATTCAAGATGCAGGTAGTCAGCAACCGAGCAATCCCCA GGAGCTTAGATAACTCAGTG
Product: PIG3 family NAD(P)H quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTLLTHLPANMVAIEITQFGGPEVLVPAKRPTPMPAAGEILVKVSAAGVNRPDVMQRRGQYAPPPGASDIPGLEVAGEVV AIAADVTRFKIGDNVCGLIAGGGYAQYCVIHETNALPIPQGLSAIEAAALPETFFTVWTNLFQRGHFTAGETVLIHGGSS GIGTTAILLSKAFGAATVIVTVGSEEKRQACLNLGADIAINYHTQDFVAETKRATAGKGADVIVDLIAGDYVARNYDAAA MNGRIVQIGTQNGHAKDLNLMLMLIKRLTHTGSTLRSRTVAEKALIANELEQHVWPLLSEGKMKPQIFSTFPLEAAAKAH ELMESSTHIGKIVLTA
Sequences:
>Translated_336_residues MTLLTHLPANMVAIEITQFGGPEVLVPAKRPTPMPAAGEILVKVSAAGVNRPDVMQRRGQYAPPPGASDIPGLEVAGEVV AIAADVTRFKIGDNVCGLIAGGGYAQYCVIHETNALPIPQGLSAIEAAALPETFFTVWTNLFQRGHFTAGETVLIHGGSS GIGTTAILLSKAFGAATVIVTVGSEEKRQACLNLGADIAINYHTQDFVAETKRATAGKGADVIVDLIAGDYVARNYDAAA MNGRIVQIGTQNGHAKDLNLMLMLIKRLTHTGSTLRSRTVAEKALIANELEQHVWPLLSEGKMKPQIFSTFPLEAAAKAH ELMESSTHIGKIVLTA >Mature_335_residues TLLTHLPANMVAIEITQFGGPEVLVPAKRPTPMPAAGEILVKVSAAGVNRPDVMQRRGQYAPPPGASDIPGLEVAGEVVA IAADVTRFKIGDNVCGLIAGGGYAQYCVIHETNALPIPQGLSAIEAAALPETFFTVWTNLFQRGHFTAGETVLIHGGSSG IGTTAILLSKAFGAATVIVTVGSEEKRQACLNLGADIAINYHTQDFVAETKRATAGKGADVIVDLIAGDYVARNYDAAAM NGRIVQIGTQNGHAKDLNLMLMLIKRLTHTGSTLRSRTVAEKALIANELEQHVWPLLSEGKMKPQIFSTFPLEAAAKAHE LMESSTHIGKIVLTA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=331, Percent_Identity=40.785498489426, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI22538444, Length=331, Percent_Identity=40.785498489426, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI194239674, Length=330, Percent_Identity=30.6060606060606, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI13236495, Length=330, Percent_Identity=30.6060606060606, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI18379349, Length=312, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI194239676, Length=330, Percent_Identity=28.7878787878788, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI24308257, Length=341, Percent_Identity=25.5131964809384, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI28557745, Length=228, Percent_Identity=32.8947368421053, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI41872631, Length=305, Percent_Identity=27.5409836065574, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI197927207, Length=199, Percent_Identity=28.643216080402, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI47519420, Length=371, Percent_Identity=26.4150943396226, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1790485, Length=325, Percent_Identity=32, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1787863, Length=345, Percent_Identity=26.9565217391304, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507255, Length=327, Percent_Identity=26.2996941896024, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI212642053, Length=308, Percent_Identity=27.9220779220779, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536829, Length=187, Percent_Identity=29.9465240641711, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=334, Percent_Identity=27.2455089820359, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324486, Length=337, Percent_Identity=24.3323442136499, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323729, Length=334, Percent_Identity=23.9520958083832, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=284, Percent_Identity=23.943661971831, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI19920632, Length=310, Percent_Identity=28.7096774193548, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI221330659, Length=310, Percent_Identity=28.7096774193548, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24581345, Length=317, Percent_Identity=26.813880126183, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35462; Mature: 35331
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLTHLPANMVAIEITQFGGPEVLVPAKRPTPMPAAGEILVKVSAAGVNRPDVMQRRGQ CCEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCC YAPPPGASDIPGLEVAGEVVAIAADVTRFKIGDNVCGLIAGGGYAQYCVIHETNALPIPQ CCCCCCCCCCCCCHHCCCEEEEEECCEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCC GLSAIEAAALPETFFTVWTNLFQRGHFTAGETVLIHGGSSGIGTTAILLSKAFGAATVIV CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEE TVGSEEKRQACLNLGADIAINYHTQDFVAETKRATAGKGADVIVDLIAGDYVARNYDAAA EECCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEHHCCHHHCCCCCHH MNGRIVQIGTQNGHAKDLNLMLMLIKRLTHTGSTLRSRTVAEKALIANELEQHVWPLLSE CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKMKPQIFSTFPLEAAAKAHELMESSTHIGKIVLTA CCCCCHHEECCCHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure TLLTHLPANMVAIEITQFGGPEVLVPAKRPTPMPAAGEILVKVSAAGVNRPDVMQRRGQ CEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCC YAPPPGASDIPGLEVAGEVVAIAADVTRFKIGDNVCGLIAGGGYAQYCVIHETNALPIPQ CCCCCCCCCCCCCHHCCCEEEEEECCEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCC GLSAIEAAALPETFFTVWTNLFQRGHFTAGETVLIHGGSSGIGTTAILLSKAFGAATVIV CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEE TVGSEEKRQACLNLGADIAINYHTQDFVAETKRATAGKGADVIVDLIAGDYVARNYDAAA EECCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEHHCCHHHCCCCCHH MNGRIVQIGTQNGHAKDLNLMLMLIKRLTHTGSTLRSRTVAEKALIANELEQHVWPLLSE CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKMKPQIFSTFPLEAAAKAHELMESSTHIGKIVLTA CCCCCHHEECCCHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]