| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023973
Identifier: 170023973
GI number: 170023973
Start: 1920372
End: 1921271
Strand: Reverse
Name: 170023973
Synonym: YPK_1732
Alternate gene names: NA
Gene position: 1921271-1920372 (Counterclockwise)
Preceding gene: 170023974
Following gene: 170023972
Centisome position: 40.97
GC content: 47.78
Gene sequence:
>900_bases ATGTGTATTGATAAACCAGAGTCAGATCCGCTGATCCTTACACTTCCTAACACGCGCTGGGACCAGAATGCAGAGGATAA TACCGGTGCCATTGAGGCACTTGAGCAAGGTAAAGTCCTGTTCTTACCTCACCTGACTTTTGAACTGAGTGAGCAGGAAA AACAGTTACTGGACCCTACCCTGGTTGATGTTAAACGCAAGAATATCAGTTTCAAACCGTTAGAAGGTGTATTAACTGGC GTGACTGATGCAAGCAAAATCGCATTAACCCGCCAGTTATTGGATCGTTATTATCAAAGTTGCCTCAGTTTGGTACAGCA ACTCCTCCCGGTCTATACGCATGCGCTACACAGCCCGACCAATAGCTTGAGATTACACCCTGTGGCCGCCTGGCGCGACA GTACGTCATGGCGTAAAGATGATAGCCGCTTACATGTAGATGCTTTCCCGTCACGCCCAAACTACGGTGAGCGTATCATC CGCATATTCACCAATATTAACCCGCATGGTGAAGCGCGTTCCTGGCGTGTCGGTGAAGATTTTACACAACTTGCCAGCCG CTATTTGCCACAACTGGATAGCTATTCATCGCTCAGCAGTTGGTTGCAACATAAAATCGGTATCACCAAGCGCCCCCGTA GCCATTACGACCATCTGATGCTCCAACTGCATGACAAAATGAAGGCCGATCTCGCTTATCAAAAAGATGGCTTACAACAG GCCATTGAGTTCCCACCAGGCAGCAGTTGGATATGCTTTTCGGATCAAACACCTCATGCGGCGATGGGCGGACAATTTAT GTTGGAGCAAACGTTCCTACTACCTGTTGAAGGAATGAAATCCTCCCAGCGCTCACCACTGAAAATACTGGAAGCGTTGA CACAAAAAACGCTGATATAA
Upstream 100 bases:
>100_bases AAAATATAAAAAGCGGAAGTGAGCATCTCAAGCCTCACGTTACCTATAATAAAGGGTTATTATTGACAGAATTATATTGA TATTTAGGAGCAGATCTTTG
Downstream 100 bases:
>100_bases GTGGCCACATAGCGTCTAACTCCCTCACTAACCCTATGGGGGAGTTAATAGACTAAGGCTCACGCGCCTGCCTGATATAC ACCGCCAACTAATCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI
Sequences:
>Translated_299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI >Mature_299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34129; Mature: 34129
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCHH LVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPT HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGED CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH FTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI HHCCCCCCCEEEECCCCCCHHCCCCEEEHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCHH LVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPT HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGED CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH FTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI HHCCCCCCCEEEECCCCCCHHCCCCEEEHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA