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The map label for this gene is ecnR [H]

Identifier: 170023912

GI number: 170023912

Start: 1856482

End: 1857066

Strand: Reverse

Name: ecnR [H]

Synonym: YPK_1671

Alternate gene names: 170023912

Gene position: 1857066-1856482 (Counterclockwise)

Preceding gene: 170023913

Following gene: 170023911

Centisome position: 39.6

GC content: 37.61

Gene sequence:

>585_bases
ATGAAAATATTAATCATCGACGAATGCTTTTATACTCGTTCTGGAGTCAATACCTATTTGAATAGTGTCTCATCTATAAA
ATTAATGGATGTCCCTACCGTTGAAGAGGCAACTTTAGCTATTCAAGAATTTCAGCCGGATATAATTATTGTTAATTTAA
CTCAATATTGTCGCTATGGTGGTCATTGTCCATTGTTAGCGCAATTTATTCATTACTGTACCCGAGCTAAAGTTTATATC
TATTTAGATGCTTCTTACCCTTTTAGTGAAACGCCTATTCCTCTGACAGAATCCGTATCAATACTGGCTAAGAAACATCT
ACCCAATTTACTCCGCAGGTTACCTGGTTTCTCTCTTGAGAGGCTAGGCATTCAGCCAAACCAACAGGCTTCCCTGTTCA
GCCCACAAGAGCACAAAGTGATGTGTTACTGGATGACAGAGATGCCTAACTATCGCATTGCCAGAAAGCTAAATATCAGC
GGCAGTACGGTTTACTCACATAAACGTCATATCACCGAGAAAATAAAAGTCAGGAATAGATTGGAATTGTGTTTCATTTA
TAATGTGTTTAAGTATTTGTACTAG

Upstream 100 bases:

>100_bases
ACCACTCGCGATTCCCGAATTGACGTTCAAGCCTTTAGGGGATTACCTTATCCTTGTTTGCGACTAAATATAGTTGCTGT
CAGACAAGGATGTAAATCAT

Downstream 100 bases:

>100_bases
TTATTACTGATAAATCATAAATTATCGACACAATACATTCCATTCTAATTATTAACTTGTTAATCAGTTAGTGAATAATA
TATCATCACTTATATCAACC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Entericidin R [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCRYGGHCPLLAQFIHYCTRAKVYI
YLDASYPFSETPIPLTESVSILAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNIS
GSTVYSHKRHITEKIKVRNRLELCFIYNVFKYLY

Sequences:

>Translated_194_residues
MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCRYGGHCPLLAQFIHYCTRAKVYI
YLDASYPFSETPIPLTESVSILAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNIS
GSTVYSHKRHITEKIKVRNRLELCFIYNVFKYLY
>Mature_194_residues
MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCRYGGHCPLLAQFIHYCTRAKVYI
YLDASYPFSETPIPLTESVSILAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNIS
GSTVYSHKRHITEKIKVRNRLELCFIYNVFKYLY

Specific function: May serve to repress the entericidin locus in c.freundii [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 22639; Mature: 22639

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCRYG
CEEEEEECCHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHCCC
GHCPLLAQFIHYCTRAKVYIYLDASYPFSETPIPLTESVSILAKKHLPNLLRRLPGFSLE
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
RLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNISGSTVYSHKRHITEKIKVRNR
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
LELCFIYNVFKYLY
HHHHHHHHHHHHHC
>Mature Secondary Structure
MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCRYG
CEEEEEECCHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHCCC
GHCPLLAQFIHYCTRAKVYIYLDASYPFSETPIPLTESVSILAKKHLPNLLRRLPGFSLE
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
RLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNISGSTVYSHKRHITEKIKVRNR
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
LELCFIYNVFKYLY
HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9677290 [H]