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The map label for this gene is rhiA [H]

Identifier: 170023827

GI number: 170023827

Start: 1754394

End: 1755038

Strand: Direct

Name: rhiA [H]

Synonym: YPK_1586

Alternate gene names: 170023827

Gene position: 1754394-1755038 (Clockwise)

Preceding gene: 170023826

Following gene: 170023828

Centisome position: 37.41

GC content: 45.43

Gene sequence:

>645_bases
ATGAATAATACTTTGGATCTATCAGCCGCTGCTGGCACCCCCTATCAAGTTAAGTTCGTTAATCATTCATCTTCGGCCTG
GACTGTTTTTTTATATCAAAAAATGCCAAATCAACCCTCGGATGTCTTTTCTTTGGCTTGGCAAGCCTCGCCATTTAAAG
TCGCACCTAATAGTTTCTTTACGTTTAAATGGTCGATTAACTACTCATTTGTCTGGGGGAGAACCGGGCATCTCACTGAC
GGGGTTCTTTTTGAAGCGGGTGCTATTTTGGATGCTGATCCCACCAGTCATAATCAGGTGACGTTTGATACTGCGGATAA
CACACCCACTTTTAGCAATCTCTCAACCGCAGGGCAAGCGGGTAAATTGACGATTATTGAAGGCGGCAGCATGCCAAATA
ATGTTTATTCGACGGGGATTGGCATGTCCGGGCAGGGCACCTTTGCCCAGCAAGTCTTAGCCAATACAACTCAACTCTAT
ACGCCTGAACCTCTCTATTTTATTGCTGCGGGTCAGGGGGTCCAGATGGGGCAGGTGTTGGCACAAACGGTGACGAACAG
TAATGAGTTGAAATACTCGGGTAATATATATTCATTAGTCGCCACATTGGATGAAACACAGCAATGGAATGTCGTACCTG
CTTAA

Upstream 100 bases:

>100_bases
CTGAGAAATGGCTTGGCTCTCTATGTCACCTTTATTTGAAATAGGCGAATATCGTTAGCGTGAATAATATACTTTACATA
AATGTAATAAGGAACTCATC

Downstream 100 bases:

>100_bases
TATAATCAACGTCATTGGAGTTGCAGCAGTGTCAGCGTTTCCCTTGGGCCGGATCATGGATACCCGTGCACTTAACGAGG
CTAATAGGCCTCCTGCTTGA

Product: protein RhiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNNTLDLSAAAGTPYQVKFVNHSSSAWTVFLYQKMPNQPSDVFSLAWQASPFKVAPNSFFTFKWSINYSFVWGRTGHLTD
GVLFEAGAILDADPTSHNQVTFDTADNTPTFSNLSTAGQAGKLTIIEGGSMPNNVYSTGIGMSGQGTFAQQVLANTTQLY
TPEPLYFIAAGQGVQMGQVLAQTVTNSNELKYSGNIYSLVATLDETQQWNVVPA

Sequences:

>Translated_214_residues
MNNTLDLSAAAGTPYQVKFVNHSSSAWTVFLYQKMPNQPSDVFSLAWQASPFKVAPNSFFTFKWSINYSFVWGRTGHLTD
GVLFEAGAILDADPTSHNQVTFDTADNTPTFSNLSTAGQAGKLTIIEGGSMPNNVYSTGIGMSGQGTFAQQVLANTTQLY
TPEPLYFIAAGQGVQMGQVLAQTVTNSNELKYSGNIYSLVATLDETQQWNVVPA
>Mature_214_residues
MNNTLDLSAAAGTPYQVKFVNHSSSAWTVFLYQKMPNQPSDVFSLAWQASPFKVAPNSFFTFKWSINYSFVWGRTGHLTD
GVLFEAGAILDADPTSHNQVTFDTADNTPTFSNLSTAGQAGKLTIIEGGSMPNNVYSTGIGMSGQGTFAQQVLANTTQLY
TPEPLYFIAAGQGVQMGQVLAQTVTNSNELKYSGNIYSLVATLDETQQWNVVPA

Specific function: May be involved in plant-microbe interaction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23130; Mature: 23130

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTLDLSAAAGTPYQVKFVNHSSSAWTVFLYQKMPNQPSDVFSLAWQASPFKVAPNSFF
CCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHEEEEECCCCEEECCCCEE
TFKWSINYSFVWGRTGHLTDGVLFEAGAILDADPTSHNQVTFDTADNTPTFSNLSTAGQA
EEEEEEEEEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
GKLTIIEGGSMPNNVYSTGIGMSGQGTFAQQVLANTTQLYTPEPLYFIAAGQGVQMGQVL
CEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHH
AQTVTNSNELKYSGNIYSLVATLDETQQWNVVPA
HHHHCCCCCEEECCCEEEEEEECCCCCCEEEECC
>Mature Secondary Structure
MNNTLDLSAAAGTPYQVKFVNHSSSAWTVFLYQKMPNQPSDVFSLAWQASPFKVAPNSFF
CCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHEEEEECCCCEEECCCCEE
TFKWSINYSFVWGRTGHLTDGVLFEAGAILDADPTSHNQVTFDTADNTPTFSNLSTAGQA
EEEEEEEEEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
GKLTIIEGGSMPNNVYSTGIGMSGQGTFAQQVLANTTQLYTPEPLYFIAAGQGVQMGQVL
CEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHH
AQTVTNSNELKYSGNIYSLVATLDETQQWNVVPA
HHHHCCCCCEEECCCEEEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1597418 [H]