| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023814
Identifier: 170023814
GI number: 170023814
Start: 1740149
End: 1741228
Strand: Direct
Name: 170023814
Synonym: YPK_1573
Alternate gene names: NA
Gene position: 1740149-1741228 (Clockwise)
Preceding gene: 170023813
Following gene: 170023819
Centisome position: 37.11
GC content: 34.07
Gene sequence:
>1080_bases ATGTGGGTTTTACCTATAAATTCTAATCCGACTGTTTTACATCCACCAATGGTGGATAGAGTTTATATCGATCGACAGAT CGATGAATTGGAACTTTATTTTTGTCCTGATACCGGAAAATGTAAAAAATTGACTACTGAAATGAGAGTCCGCAATGAAA TATATAAAAATCTGGATTATTTTTATTACTTTTTGGAAAAATCATACACTAGTGTCGCGCTGAGTTTGCTGATTGTAGAA CAGGCGTGGACAAATACACATCAACCCGTTTCACGTGGAAACATCAAACCAGAATATAGGCTTGATGACTACCGTAGAGA ATCGCTTTGTGAATTTGCTATCAGAGAGATACTGAAAACAGTAGATGAAGCAATAATATCGCAACCCAGTACAACCGATA GTTTTACTAAAAAAAAGAACAAAAAGGCATATGAAGATATTATCTCAATGGTTTCGTATTTAGTAGGGTTGACTAAAGAT AAAATACAGGGAGCAAAGCAACGCTATGGTTCAGACCCTATAACGCAAGTTTTATTTCAGGAATTTAACAAAAGAAATAT ATTTCATGACTATAGCGGCAATGAACAGGATGTATTAAAAGAAGCTATGAATGGGATCGTTTATTCATGTTATAAATTCT ATAGTGAGAAAGAAAAATTACCTAGTGTAGACGTAATAAAAAAAATTATGAAAGAGGTGCCGCAGAGTATTAATTATCCG GATTCTGAGACTGCCGCCTATCGCCTTATCTCTAAAATTATCATTGACCCTATTATTATGGGTGTTAATTATGAAAAACA TTATCATCTTTTGCATTTAAATGCGTTGGCCAAAACGCTAATTGCAAAAGATATTCCTGATTCCCATAACCATAAATATA AACATTATCTCGACGATAATTTAAATAATAATAAATTTATCCGCTTATTTTTTTGGATAAAACCTTCGATATCCGCAAAA GTGAACTTTATCAGCGAGTCGAGCAACATTTACGGGAGATCAATGAAAACATCTCTGCGGATGATATTCTCCGGTGCTGC AAAGATTATTATGAATTTGCCCGTGAAAAGTATGCGCTGA
Upstream 100 bases:
>100_bases AGATTAGGGTTAACCATGGATATCTGTCAGTAGGCTTGATAGTTAGAATATTTAATTAACTGTTCAGTCTCTCGCTTTAT CTGATTTAGGGATCATCGTC
Downstream 100 bases:
>100_bases AAATACCTTCTTTGGCTGAAGTTGAGTTTACGGAACAACTCACGCGCAGCGGCCATATCTCAGCAGCAATAGAACATCGG CGTCATGGTACGTATCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFWIKPSISAK VNFISESSNIYGRSMKTSLRMIFSGAAKIIMNLPVKSMR
Sequences:
>Translated_359_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFWIKPSISAK VNFISESSNIYGRSMKTSLRMIFSGAAKIIMNLPVKSMR >Mature_359_residues MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDYFYYFLEKSYTSVALSLLIVE QAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKD KIQGAKQRYGSDPITQVLFQEFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDNLNNNKFIRLFFWIKPSISAK VNFISESSNIYGRSMKTSLRMIFSGAAKIIMNLPVKSMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41944; Mature: 41944
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDY CEEEEECCCCCEECCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH FYYFLEKSYTSVALSLLIVEQAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKDKIQGAKQRYGSDPITQVLFQ HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH EFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDN CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHCCC LNNNKFIRLFFWIKPSISAKVNFISESSNIYGRSMKTSLRMIFSGAAKIIMNLPVKSMR CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MWVLPINSNPTVLHPPMVDRVYIDRQIDELELYFCPDTGKCKKLTTEMRVRNEIYKNLDY CEEEEECCCCCEECCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH FYYFLEKSYTSVALSLLIVEQAWTNTHQPVSRGNIKPEYRLDDYRRESLCEFAIREILKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VDEAIISQPSTTDSFTKKKNKKAYEDIISMVSYLVGLTKDKIQGAKQRYGSDPITQVLFQ HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH EFNKRNIFHDYSGNEQDVLKEAMNGIVYSCYKFYSEKEKLPSVDVIKKIMKEVPQSINYP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DSETAAYRLISKIIIDPIIMGVNYEKHYHLLHLNALAKTLIAKDIPDSHNHKYKHYLDDN CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHCCC LNNNKFIRLFFWIKPSISAKVNFISESSNIYGRSMKTSLRMIFSGAAKIIMNLPVKSMR CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA