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The map label for this gene is dedD [H]

Identifier: 170023774

GI number: 170023774

Start: 1696249

End: 1696986

Strand: Direct

Name: dedD [H]

Synonym: YPK_1533

Alternate gene names: 170023774

Gene position: 1696249-1696986 (Clockwise)

Preceding gene: 170023773

Following gene: 170023775

Centisome position: 36.17

GC content: 51.36

Gene sequence:

>738_bases
GTGGCAAGTCAGTTCCAGAACCGTTTAGTCGGGACCATTATTTTAGTTGCCTTAGGTGTGATTGTGTTACCGGGGCTACT
GGATGGCAAAAAGAAGCACTATGAGGATGAGTTTGCTGCTATTCCGTTAGTGCCAAAACCAGGGGATAGCCAAGAGATTG
ATGTGGTTCCGCCGCTCAATCAGCCTCTTCCCATTACGCCGCCCGAAGGTGCAGCACAAGCGGTAGGCGCCGAACTCAAC
GATGATTCGGTTTCTCAGGCGGCTAATGATGCCGGCAATCTTGCCGTTGAACCTACGATTGTGGCACCGCCACCAATCCA
GAGTAAGCCGGTTGAGGTAAAACCTACCGTGACGAAGCCGGTAGACGTTAAGCCGACAGAAACCAAGCCGACAGAAACCA
AGCCGATAGAAACAAAACCAGCAGAGAAAAAACCGCTGGAAGTGAAACCTAAGCCAGAAATCAAACCGCCGGTGGAAGAA
AAAGCGCCAGTGGGGCAGGCTTATGTTGTCCAACTGGGGGCGCTAAAAAATGCAGCCAAAGTAAATGAGATTGTCGCGAT
GCTGCGGTTGTCGGGGCATCGGGCGTTCACTGTACCCGCCACGCCGGTTCAGGGTGAGATAACCCGGTTATATGTCGGGC
CGGATGCATCAAAACAGAAATTACAATCCGCGTTACCTGAGCTTAATGCATTAAGTGGTCTGAATGGGCAAGTTAAGCCT
TATACAACGTCGCGTTAG

Upstream 100 bases:

>100_bases
GATTGAATTTAAACCCAAAGAGCATGGAGTTGCAGGCGGGCAGTAAACGATCGCTTCCTGCATCTTCAAGTCCGGCGGGA
GATAAACGCGGGGAGTGCGA

Downstream 100 bases:

>100_bases
GGTGACTACTGTCCTAGATTGTACTGTCTTAAATTGTACTGTCTTAAATTGTTACTGTCTTAAATTGTTACTGTCTTAGG
TTGCCGACTGCGTCAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELN
DDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPTETKPIETKPAEKKPLEVKPKPEIKPPVEE
KAPVGQAYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKP
YTTSR

Sequences:

>Translated_245_residues
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELN
DDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPTETKPIETKPAEKKPLEVKPKPEIKPPVEE
KAPVGQAYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKP
YTTSR
>Mature_244_residues
ASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELND
DSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEK
APVGQAYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPY
TTSR

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=243, Percent_Identity=53.0864197530864, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 25954; Mature: 25823

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCEEEECCCC
QPLPITPPEGAAQAVGAELNDDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKP
CCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEECCEEECCCCCCCCCEEECCCCCCC
VDVKPTETKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVGQAYVVQLGALKNAAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEHHHHHHHH
VNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKP
HHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCC
YTTSR
CCCCC
>Mature Secondary Structure 
ASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCEEEECCCC
QPLPITPPEGAAQAVGAELNDDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKP
CCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEECCEEECCCCCCCCCEEECCCCCCC
VDVKPTETKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVGQAYVVQLGALKNAAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEHHHHHHHH
VNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKP
HHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCC
YTTSR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]