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The map label for this gene is smfA [H]

Identifier: 170023763

GI number: 170023763

Start: 1685070

End: 1685600

Strand: Direct

Name: smfA [H]

Synonym: YPK_1522

Alternate gene names: 170023763

Gene position: 1685070-1685600 (Clockwise)

Preceding gene: 170023761

Following gene: 170023767

Centisome position: 35.93

GC content: 46.89

Gene sequence:

>531_bases
ATGTCTAACTTCAAGAAAAGTGTATTAGTTGCTGCTGTATTGTCTCTTTCTGCCTTCGCTGCTAATGCTGCTGACCAAGG
TAAGGGTAAAGTGACTTTTACCGGTTCTATCATTGAAGCACCTTGTTCAATTACTTCCGAAGCGGCTGATCAGGTTGTTG
AACTGGGCCAAATTTCTACTGCATCACTGGCTAACATGGGCTCTTCTGAACCACGTAGTTTCAGCATTGGTCTGGAGAAA
TGTGATGTGGCTACGATGAAGAATGTGTCTGTCACCTTTGATGGTACACCCGATGGTGTGGATGCTGAGATGTTGAAACT
GATTGGTTTGGCTGATGGTGCAGGTATTGTGATCACCGATGAAGCGGGTGCGACAATTAAACGTGGTGTGGCGTCGGTGG
GCAAGACCCTGGATCAGGGCAGTAACAGCCTGAAATTCTCTGCTTACCTGAAAGGTACCAGTGCAGATGAAGGTAGTGTG
GTCCCCGGCGAATTCAGCAGCGTAGCTAACTTTACCCTCGCTTATAATTAA

Upstream 100 bases:

>100_bases
TTATAATAAGTAGTAAGACGCTTCCGCAGATAAAATATTTTGCGATAATAAGGTCTTTCTATATTAATGAAAAAACTTCA
AATTAAATTAAGGTTATATA

Downstream 100 bases:

>100_bases
TTACAGATTTTAAGCTGTCTAAATTGCTTAAAAAAGCATGTGGAAGATATTCTGCATGCTTTTTTATATGCTATATAAAA
GAATGAATTTTTTTAACTTC

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTASLANMGSSEPRSFSIGLEK
CDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSV
VPGEFSSVANFTLAYN

Sequences:

>Translated_176_residues
MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTASLANMGSSEPRSFSIGLEK
CDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSV
VPGEFSSVANFTLAYN
>Mature_175_residues
SNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTASLANMGSSEPRSFSIGLEKC
DVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVV
PGEFSSVANFTLAYN

Specific function: Major structural component of mannose-resistant fimbriae of Serratia marcescens [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786938, Length=184, Percent_Identity=30.9782608695652, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI87081805, Length=153, Percent_Identity=33.9869281045752, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789422, Length=189, Percent_Identity=32.8042328042328, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI87082421, Length=179, Percent_Identity=31.2849162011173, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1790769, Length=130, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI87081753, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17854; Mature: 17723

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQIST
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHCCCCH
ASLANMGSSEPRSFSIGLEKCDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITD
HHHHCCCCCCCCEEECCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEC
EAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVVPGEFSSVANFTLAYN
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
SNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQIST
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHCCCCH
ASLANMGSSEPRSFSIGLEKCDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITD
HHHHCCCCCCCCEEECCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEC
EAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVVPGEFSSVANFTLAYN
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2900238 [H]