Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yfcL [H]
Identifier: 170023759
GI number: 170023759
Start: 1679259
End: 1679537
Strand: Direct
Name: yfcL [H]
Synonym: YPK_1518
Alternate gene names: 170023759
Gene position: 1679259-1679537 (Clockwise)
Preceding gene: 170023758
Following gene: 170023761
Centisome position: 35.81
GC content: 51.97
Gene sequence:
>279_bases ATGATCGCAGAATTTGAAACACGTATCTTGGCGCAAATCGATGACATGGTAGAGCACGCCAGTGATGATGATTTATTTGC CGGAGGGTACCTGCGAGGCCATCTGACACTGGCCGTGGCTGAAGCGGAAGAGCACGGTGAGCACTCCGCTGAACAGTTAC ATGCGCGAGTACAAACCAGTCTGGAGAAGGCCATCAAGGCCGGTGAGCTTTCCCCTCCAGATCAGGTTTTGGTGTTAGGT CTTTGGGATCGTTTATTAGCACACGCCCTTCGTTCTTGA
Upstream 100 bases:
>100_bases GTTGGCTCCTGAACTCTTTCCTTACCCGGAAGATTTGATTTAGCACCTACCTGCAATGCCAATGACGTTGGGCACAAAAT AAATATAATGAGGAAGAGTG
Downstream 100 bases:
>100_bases AGCCGCAGGGGTGTTAGCTACGCGCATTCACCCGAATCACTGACTGGTTGTTGACCTTAAAATAGATAGACTCATCGGGA TTCATTTACTTGCTGCCTAC
Product: YfcL protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIAEFETRILAQIDDMVEHASDDDLFAGGYLRGHLTLAVAEAEEHGEHSAEQLHARVQTSLEKAIKAGELSPPDQVLVLG LWDRLLAHALRS
Sequences:
>Translated_92_residues MIAEFETRILAQIDDMVEHASDDDLFAGGYLRGHLTLAVAEAEEHGEHSAEQLHARVQTSLEKAIKAGELSPPDQVLVLG LWDRLLAHALRS >Mature_92_residues MIAEFETRILAQIDDMVEHASDDDLFAGGYLRGHLTLAVAEAEEHGEHSAEQLHARVQTSLEKAIKAGELSPPDQVLVLG LWDRLLAHALRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788665, Length=89, Percent_Identity=66.2921348314607, Blast_Score=117, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014987 [H]
Pfam domain/function: PF08891 YfcL [H]
EC number: NA
Molecular weight: Translated: 10126; Mature: 10126
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEFETRILAQIDDMVEHASDDDLFAGGYLRGHLTLAVAEAEEHGEHSAEQLHARVQTS CCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEHHEEEEEECCHHCCCHHHHHHHHHHHHH LEKAIKAGELSPPDQVLVLGLWDRLLAHALRS HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MIAEFETRILAQIDDMVEHASDDDLFAGGYLRGHLTLAVAEAEEHGEHSAEQLHARVQTS CCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEHHEEEEEECCHHCCCHHHHHHHHHHHHH LEKAIKAGELSPPDQVLVLGLWDRLLAHALRS HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]