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The map label for this gene is 170023730

Identifier: 170023730

GI number: 170023730

Start: 1652021

End: 1652827

Strand: Direct

Name: 170023730

Synonym: YPK_1489

Alternate gene names: NA

Gene position: 1652021-1652827 (Clockwise)

Preceding gene: 170023729

Following gene: 170023731

Centisome position: 35.23

GC content: 45.23

Gene sequence:

>807_bases
ATGAATACCACGAATTTAACTGAGTTATTAAAAAGCGCGTCTTTAACCGAAATGCTGGCCGATGTCATTGCTACGATAAA
AGCTAAACCAACGGATACCGATACGCGAGAACTGTTATTCAAACTCTATTGTATTGATGGTTCATGGCAAAAAGCCCTAT
TGCAGCTTGAAACATTGACACAGCTTTTACCTGAGTTCACCAAACAGGCTGAACTCTATAAAAATCTGATATTGAGTGAG
AAAATGCGTGATGAAGTACTGGCAGGCAAACGCAGCCCTGGTACGTTGGGTAACGACCTGCCTGAATGGGTAGCCTTGTT
GCAACAAGCTAATCAACTCCACCATGATGGCGATCATCAGCAAAGTGAGGCCCTCCGTGAACAGGCTCTGCAACAGGCAC
CGGAAAGTATCGGAGAGAGCGCTGCGACAGGCTGCTTCGCTTGGATTGCTGACAGTGATGGGCGTATGGGGCCTGTTTGT
GAGTTTATTAGCGCCGGCGGTTACCGTTGGGTCCCGTTTGCAGAGATACAATCACTCACTGTTTCCAAACCTAAAAATAT
TACAGACCTGATATGGGCGCCGGCACAGGTTAAAGTAAAGGATAAAGTTTGGTACGGTTATATACCTGCCCGCTATCCAC
TGACACCTGAAACAGACAATGAAACTAAACTGGGTCTTAAAACAGAATGGCATCAACCGACTGACTCACTTTATATTGGG
GCAGGGCGGAAAATGTTTATCACCGACCAAGGTGAGCATGCGCTGTTTGATATTGAAGAGATTGTATTTGAGATAGATTG
TATTTGA

Upstream 100 bases:

>100_bases
TTTATAACAAAAGAAAAAAACAGTGTGCCTTCGCTCATGTTTCAGGAGCTCTACAAGCTAGGGCTGGACAGCCATCTATA
AATACGGATAAAACAAGATA

Downstream 100 bases:

>100_bases
GATAGATTGTGTTTGATAACACATGTATTAGATAAAAAATGTATTTGCGCCAACAGGCTGAGTAATGGAAAAGAAAAAAC
AGTTTTTACCGGCGTTGTTA

Product: virulence protein SciE type

Products: NA

Alternate protein names: ImpE Family Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpE; ImpE-Like Protein; Virulence Protein SciE Type Family Protein; ImpE Family T6SS E; ImpE Protein Superfamily Protein; Secretion Protein; ImpE Protein; Cytoplasmic Protein SciE; Protein Of Avirulence Locus ImpE

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNTTNLTELLKSASLTEMLADVIATIKAKPTDTDTRELLFKLYCIDGSWQKALLQLETLTQLLPEFTKQAELYKNLILSE
KMRDEVLAGKRSPGTLGNDLPEWVALLQQANQLHHDGDHQQSEALREQALQQAPESIGESAATGCFAWIADSDGRMGPVC
EFISAGGYRWVPFAEIQSLTVSKPKNITDLIWAPAQVKVKDKVWYGYIPARYPLTPETDNETKLGLKTEWHQPTDSLYIG
AGRKMFITDQGEHALFDIEEIVFEIDCI

Sequences:

>Translated_268_residues
MNTTNLTELLKSASLTEMLADVIATIKAKPTDTDTRELLFKLYCIDGSWQKALLQLETLTQLLPEFTKQAELYKNLILSE
KMRDEVLAGKRSPGTLGNDLPEWVALLQQANQLHHDGDHQQSEALREQALQQAPESIGESAATGCFAWIADSDGRMGPVC
EFISAGGYRWVPFAEIQSLTVSKPKNITDLIWAPAQVKVKDKVWYGYIPARYPLTPETDNETKLGLKTEWHQPTDSLYIG
AGRKMFITDQGEHALFDIEEIVFEIDCI
>Mature_268_residues
MNTTNLTELLKSASLTEMLADVIATIKAKPTDTDTRELLFKLYCIDGSWQKALLQLETLTQLLPEFTKQAELYKNLILSE
KMRDEVLAGKRSPGTLGNDLPEWVALLQQANQLHHDGDHQQSEALREQALQQAPESIGESAATGCFAWIADSDGRMGPVC
EFISAGGYRWVPFAEIQSLTVSKPKNITDLIWAPAQVKVKDKVWYGYIPARYPLTPETDNETKLGLKTEWHQPTDSLYIG
AGRKMFITDQGEHALFDIEEIVFEIDCI

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30071; Mature: 30071

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTNLTELLKSASLTEMLADVIATIKAKPTDTDTRELLFKLYCIDGSWQKALLQLETLT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QLLPEFTKQAELYKNLILSEKMRDEVLAGKRSPGTLGNDLPEWVALLQQANQLHHDGDHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
QSEALREQALQQAPESIGESAATGCFAWIADSDGRMGPVCEFISAGGYRWVPFAEIQSLT
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCEECCCHHHHHHHH
VSKPKNITDLIWAPAQVKVKDKVWYGYIPARYPLTPETDNETKLGLKTEWHQPTDSLYIG
CCCCCCCHHHEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
AGRKMFITDQGEHALFDIEEIVFEIDCI
CCCEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTTNLTELLKSASLTEMLADVIATIKAKPTDTDTRELLFKLYCIDGSWQKALLQLETLT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QLLPEFTKQAELYKNLILSEKMRDEVLAGKRSPGTLGNDLPEWVALLQQANQLHHDGDHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
QSEALREQALQQAPESIGESAATGCFAWIADSDGRMGPVCEFISAGGYRWVPFAEIQSLT
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCEECCCHHHHHHHH
VSKPKNITDLIWAPAQVKVKDKVWYGYIPARYPLTPETDNETKLGLKTEWHQPTDSLYIG
CCCCCCCHHHEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
AGRKMFITDQGEHALFDIEEIVFEIDCI
CCCEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA