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The map label for this gene is ygiW [H]

Identifier: 170023639

GI number: 170023639

Start: 1541737

End: 1542150

Strand: Reverse

Name: ygiW [H]

Synonym: YPK_1397

Alternate gene names: 170023639

Gene position: 1542150-1541737 (Counterclockwise)

Preceding gene: 170023642

Following gene: 170023638

Centisome position: 32.89

GC content: 49.52

Gene sequence:

>414_bases
ATGAAAAAATTAACCCTGGCAGCAACGCTCATTATGCTATGTGGCACCCCAGTGCTGGCCCAAAGCGCTAGCAACACCAC
ACAAGGCGGCTTTGACGGCCCGGCAACCAAGCAAACTCAGCCCGCTACCCAGGGGGGATTCACTGGCCCGAGCGCCTCCA
GCACCACAGTAGATAAAGTCAAAACCATGCGTGATGACGCCCGTGTCACCCTGCAAGGGTACATCGAAGCACGTTTGGGC
CACGATACTTACACCTTCCGTGATAGCACCGGTACGATTACTGTTGAAATTGACGACAAACGTTGGAGAGGCCAAACCAT
TACGCCACAAGATAAAGTGCAAATTGAAGGAAAAGTAGATAAAGACTGGAACTCAGTGGAAATCGATGTGAAAAATATCA
CCAAGATTAAATAA

Upstream 100 bases:

>100_bases
GAAACGCTTATTACGATTTTAGTCTATTATTGAGTACCAAAGAGGCCTATACGGGTCTCTGGCCTCAGACGAATTATTCA
TTCATTGAAGGAGCAATAAG

Downstream 100 bases:

>100_bases
TTAATTTCCCCATTCCCTACTCTCATTGACCGTTTATCGGTGCTGAGAGTAGGATTAACCCTATTTCATCGCCCCTATAA
CCTCTTTTATTCTTGATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATKQTQPATQGGFTGPSASSTTVDKVKTMRDDARVTLQGYIEARLG
HDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVDKDWNSVEIDVKNITKIK

Sequences:

>Translated_137_residues
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATKQTQPATQGGFTGPSASSTTVDKVKTMRDDARVTLQGYIEARLG
HDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVDKDWNSVEIDVKNITKIK
>Mature_137_residues
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATKQTQPATQGGFTGPSASSTTVDKVKTMRDDARVTLQGYIEARLG
HDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVDKDWNSVEIDVKNITKIK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1709 [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=137, Percent_Identity=51.8248175182482, Blast_Score=146, Evalue=5e-37,
Organism=Escherichia coli, GI1787817, Length=136, Percent_Identity=30.8823529411765, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 14906; Mature: 14906

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATKQTQPATQGGFTGPSASSTTVDKV
CCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KTMRDDARVTLQGYIEARLGHDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVD
HHHCCCCEEEEEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEC
KDWNSVEIDVKNITKIK
CCCCEEEEEECCEEECC
>Mature Secondary Structure
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATKQTQPATQGGFTGPSASSTTVDKV
CCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KTMRDDARVTLQGYIEARLGHDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVD
HHHCCCCEEEEEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEC
KDWNSVEIDVKNITKIK
CCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]