Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yaiI [C]
Identifier: 170023634
GI number: 170023634
Start: 1535879
End: 1536337
Strand: Reverse
Name: yaiI [C]
Synonym: YPK_1392
Alternate gene names: 170023634
Gene position: 1536337-1535879 (Counterclockwise)
Preceding gene: 170023635
Following gene: 170023626
Centisome position: 32.76
GC content: 50.98
Gene sequence:
>459_bases ATGCAGATTTGGGTCGATGCGGACGCCTGTCCCAATGTGATTAAAGAGGTCTTATTTCGCGCCGCTGATCGTACCGGCAT GATGGTGACATTGGTCGCTAATCAGCCACTGAAAACCCCGCCGTCGAAATTTATCCGCACAGTGCAGGTGGCTTCCGGTT TTGATGTGGCTGATAACGAGATTGTGCAGCGGGTGGAAAAAAATGATCTGGTGATCACCGCAGATATCCCACTGGCAGCA GAAGTGATTGAAAAAGGGGGGATTGCCCTAAACCCTCGTGGCGAGCGTTATACCCCAGATACTATTCGTGAGCGGCTGAA CATGCGTGATTTTATGGATACTATGCGCGCCAGCGGTATTCAGACCGGTGGCCCAAATACCTTGAATCAGCGTGACCGCC AGCAATTTGCCAATGAGCTGGATAAGTGGTTGCAGCAAGCCCGTAACCAAGCAAAATAA
Upstream 100 bases:
>100_bases AATATAACTATCAGCCAGAGGCAGATAGTGCAGAAGCCGCGTTGTACCGCGATTTTCTGCCGGTAAAAGACTGGTTAGCG ATTAAAGGAGAAACACACTA
Downstream 100 bases:
>100_bases GCACGAAGAGTGATGGAGACTGCAACACCAAGAAGAAGAGGATTACTCAACGTCATTGGCGTTGCAGCAAGGCAGCAAGC GAGCGCATCCCGATGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MQIWVDADACPNVIKEVLFRAADRTGMMVTLVANQPLKTPPSKFIRTVQVASGFDVADNEIVQRVEKNDLVITADIPLAA EVIEKGGIALNPRGERYTPDTIRERLNMRDFMDTMRASGIQTGGPNTLNQRDRQQFANELDKWLQQARNQAK
Sequences:
>Translated_152_residues MQIWVDADACPNVIKEVLFRAADRTGMMVTLVANQPLKTPPSKFIRTVQVASGFDVADNEIVQRVEKNDLVITADIPLAA EVIEKGGIALNPRGERYTPDTIRERLNMRDFMDTMRASGIQTGGPNTLNQRDRQQFANELDKWLQQARNQAK >Mature_152_residues MQIWVDADACPNVIKEVLFRAADRTGMMVTLVANQPLKTPPSKFIRTVQVASGFDVADNEIVQRVEKNDLVITADIPLAA EVIEKGGIALNPRGERYTPDTIRERLNMRDFMDTMRASGIQTGGPNTLNQRDRQQFANELDKWLQQARNQAK
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=76.9230769230769, Blast_Score=234, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 17097; Mature: 17097
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIWVDADACPNVIKEVLFRAADRTGMMVTLVANQPLKTPPSKFIRTVQVASGFDVADNE CEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH IVQRVEKNDLVITADIPLAAEVIEKGGIALNPRGERYTPDTIRERLNMRDFMDTMRASGI HHHHHHHCCEEEEECCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTGGPNTLNQRDRQQFANELDKWLQQARNQAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIWVDADACPNVIKEVLFRAADRTGMMVTLVANQPLKTPPSKFIRTVQVASGFDVADNE CEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH IVQRVEKNDLVITADIPLAAEVIEKGGIALNPRGERYTPDTIRERLNMRDFMDTMRASGI HHHHHHHCCEEEEECCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTGGPNTLNQRDRQQFANELDKWLQQARNQAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA