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The map label for this gene is napC [H]

Identifier: 170023631

GI number: 170023631

Start: 1531879

End: 1532478

Strand: Direct

Name: napC [H]

Synonym: YPK_1389

Alternate gene names: 170023631

Gene position: 1531879-1532478 (Clockwise)

Preceding gene: 170023630

Following gene: 170023632

Centisome position: 32.67

GC content: 46.0

Gene sequence:

>600_bases
ATGAGCGAGACTAAAAAACCCGGTTTTATCCGTCGGTTATGGCAGTGGTGGCGTAGACCAAGTCGTCTGGCACTCGGTAC
CTTACTGCTGATTGGTTTTGTCAGTGGCATTATCTTCTGGGGCGGTTTTAATACCGGGATGGAAATGGCGAATACCGAAA
AATTCTGTATCAGTTGCCATGAGATGAAAGATAACGTCTATGAGGAATACATGAGTACCATTCACTACAGCAACCGCAGT
GGCGTGAAAGCAACCTGCCCCGATTGCCACGTACCCCATGAGTGGGGGCCTAAAATGGTACGTAAGATTAAAGCCAGTAA
AGAGCTGTATGCCAAAGCCTTTGGTTTGATTGATACACCGCAGAAATTTGACGCTCATCGCCTGACGATGGCAGAAAGTG
AGTGGGCGCGGATGAAAGCCAATGATTCGCAAGAATGTCGCAACTGTCATAATTTCGATAATATGGATTTCAGCGCACAA
AAAACGGTGGCGGCGAAAATGCACAGCCAAGCCATTACTGAAGGTAAAACCTGTATTGATTGCCATAAAGGGATTGCCCA
TAAGTTGCCGGATATGAAAGATGTACCTATTGGTTTTTAG

Upstream 100 bases:

>100_bases
TCATGTGCCACAAACCGACGCGGCACCGATTGTTGGTAATAGCTTCCAGCCAGCACCTGGCTTTGGTCAGTAACCGAGAT
GAGTGATAAGCGAGGGCATG

Downstream 100 bases:

>100_bases
GACGCCCTTCTCCTTGATGCCGAGGGGGGGGTTAGCCGCACGATTTTGGGTATACGTCGGAGAGTGATGATTAACGCCCT
GTGGACTTTGCGTCGGCAGG

Product: cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNRS
GVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQ
KTVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF

Sequences:

>Translated_199_residues
MSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNRS
GVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQ
KTVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF
>Mature_198_residues
SETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNRSG
VKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQK
TVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=195, Percent_Identity=76.9230769230769, Blast_Score=342, Evalue=1e-95,
Organism=Escherichia coli, GI1787230, Length=185, Percent_Identity=47.027027027027, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1788181, Length=140, Percent_Identity=49.2857142857143, Blast_Score=150, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22811; Mature: 22679

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCH
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH
EMKDNVYEEYMSTIHYSNRSGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTP
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQKTVAAKMHSQAITEGKTCID
CHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
CHKGIAHKLPDMKDVPIGF
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCH
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH
EMKDNVYEEYMSTIHYSNRSGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTP
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQKTVAAKMHSQAITEGKTCID
CHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
CHKGIAHKLPDMKDVPIGF
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]