| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023564
Identifier: 170023564
GI number: 170023564
Start: 1451323
End: 1452243
Strand: Reverse
Name: 170023564
Synonym: YPK_1322
Alternate gene names: NA
Gene position: 1452243-1451323 (Counterclockwise)
Preceding gene: 170023566
Following gene: 170023561
Centisome position: 30.97
GC content: 49.4
Gene sequence:
>921_bases ATGTTACCCATTGAGTTACCCGAAGAGCCTAAAAAACTGTATTACTCCGCAGGGGAGGCCCACCCATTGGCCAAACTTGA GACGGATAAAATCCGCCAGATGGTGATTGATTTAGACGTTGCCAATTCTGATAGTGAGCATTATGTCACGGGTTGGATGG GGTTAAATAGCATCGTCGTGGTGCGTAATTATCAAAACAAACGCGGTACCGCGAACGGTTTTGTCATTAATAAAGGGGAT CGCTACCGGCTGAGCATTCAGTCTATTGAATTTCGCATCCCCAAAATGGTGTTGTGGATGAGCTTTCGCCGCAAACCACG AACCATGGAATTGATCACCTACGAAGAACTGGGCGAAAAACCAAGTGGCATGCAGCAATATCGCAATATTCTTGATGAAG AGTTACTTGGGCAGTTAGATCAAGATTGGCACGAACTGAATGACTATCTGGGTGCAGCCTGCTGGCAACTGGAGAACGGC ACCCCTCTGTGGCAACAACTCCATCAACAGATTACCCCTGATGCTATTCGTCAGTTAGCCACCGCCCCTATTTTCCGAAC CAAACATTTGCAGGCCGATGGTGAATATTCAGGCTTCTGGGCGGGGGAGTACTTCTTTGCCGTCAGGCAACCGGGCACCA AGCAAGCCGCCGATAATCCATTCCCTGCGGTGCAAATTTCCTGGCGGGAAAATGATAAAGATATCGGCAGTTATCAGTTC GATCTCATTGAAGGTGAATCGGGCGAATCAAGGCTCTCGCTGTGTATTCGTCCGCGCAAAGGTGCAAACAGCTACCTGCT TAACCGTTTTGATGCCCACCATCTGCAACGTGCGATAGCCATGTTTACTCTGGCACAGCAATATTTGTCGGGACCAGCCA CTGGCGACAGCACGGCGACGCCAGAGCGTACCAATCAATAA
Upstream 100 bases:
>100_bases ATCCATTGCACGAATTTCTCATTTCAATTTTAGTTATTTCGCAATCGGTATGACAACTTGAGTTAAGCTATGAACCAGAT AATGTTCAGAAGGCCATGCC
Downstream 100 bases:
>100_bases ACCCACCTGCAATTTTCATCATTTTCATTACCACCATTGATGAAAATGATGAACAGGCCCAACGCCCTGCCCCACCTCCA GGGTATCGGCCTGTTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLPIELPEEPKKLYYSAGEAHPLAKLETDKIRQMVIDLDVANSDSEHYVTGWMGLNSIVVVRNYQNKRGTANGFVINKGD RYRLSIQSIEFRIPKMVLWMSFRRKPRTMELITYEELGEKPSGMQQYRNILDEELLGQLDQDWHELNDYLGAACWQLENG TPLWQQLHQQITPDAIRQLATAPIFRTKHLQADGEYSGFWAGEYFFAVRQPGTKQAADNPFPAVQISWRENDKDIGSYQF DLIEGESGESRLSLCIRPRKGANSYLLNRFDAHHLQRAIAMFTLAQQYLSGPATGDSTATPERTNQ
Sequences:
>Translated_306_residues MLPIELPEEPKKLYYSAGEAHPLAKLETDKIRQMVIDLDVANSDSEHYVTGWMGLNSIVVVRNYQNKRGTANGFVINKGD RYRLSIQSIEFRIPKMVLWMSFRRKPRTMELITYEELGEKPSGMQQYRNILDEELLGQLDQDWHELNDYLGAACWQLENG TPLWQQLHQQITPDAIRQLATAPIFRTKHLQADGEYSGFWAGEYFFAVRQPGTKQAADNPFPAVQISWRENDKDIGSYQF DLIEGESGESRLSLCIRPRKGANSYLLNRFDAHHLQRAIAMFTLAQQYLSGPATGDSTATPERTNQ >Mature_306_residues MLPIELPEEPKKLYYSAGEAHPLAKLETDKIRQMVIDLDVANSDSEHYVTGWMGLNSIVVVRNYQNKRGTANGFVINKGD RYRLSIQSIEFRIPKMVLWMSFRRKPRTMELITYEELGEKPSGMQQYRNILDEELLGQLDQDWHELNDYLGAACWQLENG TPLWQQLHQQITPDAIRQLATAPIFRTKHLQADGEYSGFWAGEYFFAVRQPGTKQAADNPFPAVQISWRENDKDIGSYQF DLIEGESGESRLSLCIRPRKGANSYLLNRFDAHHLQRAIAMFTLAQQYLSGPATGDSTATPERTNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35088; Mature: 35088
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIELPEEPKKLYYSAGEAHPLAKLETDKIRQMVIDLDVANSDSEHYVTGWMGLNSIVV CCCCCCCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHEEEECCCCCCEEEEEEECCCEEEE VRNYQNKRGTANGFVINKGDRYRLSIQSIEFRIPKMVLWMSFRRKPRTMELITYEELGEK EECCCCCCCCCCCEEEECCCEEEEEEEHHHHHCHHHHHHHHHCCCCCEEEEEEHHHHCCC PSGMQQYRNILDEELLGQLDQDWHELNDYLGAACWQLENGTPLWQQLHQQITPDAIRQLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHH TAPIFRTKHLQADGEYSGFWAGEYFFAVRQPGTKQAADNPFPAVQISWRENDKDIGSYQF HCCCHHHEEECCCCCCCCEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEE DLIEGESGESRLSLCIRPRKGANSYLLNRFDAHHLQRAIAMFTLAQQYLSGPATGDSTAT EEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PERTNQ CCCCCC >Mature Secondary Structure MLPIELPEEPKKLYYSAGEAHPLAKLETDKIRQMVIDLDVANSDSEHYVTGWMGLNSIVV CCCCCCCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHEEEECCCCCCEEEEEEECCCEEEE VRNYQNKRGTANGFVINKGDRYRLSIQSIEFRIPKMVLWMSFRRKPRTMELITYEELGEK EECCCCCCCCCCCEEEECCCEEEEEEEHHHHHCHHHHHHHHHCCCCCEEEEEEHHHHCCC PSGMQQYRNILDEELLGQLDQDWHELNDYLGAACWQLENGTPLWQQLHQQITPDAIRQLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHH TAPIFRTKHLQADGEYSGFWAGEYFFAVRQPGTKQAADNPFPAVQISWRENDKDIGSYQF HCCCHHHEEECCCCCCCCEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEE DLIEGESGESRLSLCIRPRKGANSYLLNRFDAHHLQRAIAMFTLAQQYLSGPATGDSTAT EEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PERTNQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA