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The map label for this gene is yafU [C]

Identifier: 170023556

GI number: 170023556

Start: 1437665

End: 1438585

Strand: Reverse

Name: yafU [C]

Synonym: YPK_1310

Alternate gene names: 170023556

Gene position: 1438585-1437665 (Counterclockwise)

Preceding gene: 170023559

Following gene: 170023555

Centisome position: 30.68

GC content: 41.04

Gene sequence:

>921_bases
GTGACATATAAAAAGTATAACTCCAGTTGGGAAGGCTACATGGGGGATGTTTTAAACGGTAATGTTGGCATTAACCAGCT
AAAACCTCAACATGAGTATTTTGATGCTATAGGGCTAGGAAAGGTATTAAGTGAGAATACACAATACCATGCAGTTCTCA
CATTAGCAGAAGCCAAAAGTATTATTGAAGATATTAACCCTCCTCGGACACAAAGCCCAAGTAACGGAGAAGCACTGGCA
CGAGGATTTGAGATAGGAAATAAGGTTACTAATCCTGTGGCGCGGGTGTTTTCCGTTACCGATCCTATTTCTGCTTATGC
CGGAAATATCTACGACTCACGGGGAGTCTATGATGTTATCCGAGAATTTAAGCGATTCAGCATCACCGCGACAGAGTATG
TGGGCGAGAATGGGCGTAAGTATATTCACATTTCTGGTTATGCCGGCCTTAGGCGTATTATCACTGGAACCCGTTATGGT
GCCAGCCACCCACAAATGCTATCAATGGGAATCGGCCAGCAAGGTCTCAGTTCCAATATTGTTAAAGGTCTAAAATTCTG
TATTCTCTTTTCTATTGGCTATCGAACGATTGAAGGTATCTTTAAAGATGAATATACCTTAGCGGAATTTATCGGCAATA
TAACGATGGATATGGCTAAAATAGCCATTGTCGCGGCGACTTCTTTTATTGTAGGTGTACTCTTCACTGCGACAGTTCTT
GCAGGTGGCAGTATTATTGTCGTTGCTGGGGTAGCTTTTGCCGTTGGCTTTGTAGCTACCGCTATCCTAGATCATTTCGA
TGAAAAGTATGGTATAAGTGAAAAATTAATCGCATTATTAACCAAAGAAATGAGAAAAAAACCAAGAACACAAGAAGCAA
ACTTTCAGTCTATTCTTAATGGATTAGGGCGACTTAAATGA

Upstream 100 bases:

>100_bases
CCTAAAAACTAGCATTTACTTCCAGCCAGCTGAATATTAAGGTTTATTGATCATATATTATAATATACACTGATATAAAA
TAGACTAAAGAGGGATCTGA

Downstream 100 bases:

>100_bases
ATAATAGATTATTTAAAACATTAGGTGCAATCATAGCATTATTAATATTTACGCCAATGATATATTTAGTGAGCACTTAC
ATCATTTCATTAATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALA
RGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYG
ASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVL
AGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Sequences:

>Translated_306_residues
MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALA
RGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYG
ASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVL
AGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
>Mature_305_residues
TYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALAR
GFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGA
SHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLA
GGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33464; Mature: 33333

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKS
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHH
IIEDINPPRTQSPSNGEALARGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVI
HHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHH
REFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNI
HHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHH
VKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GLGRLK
HHHCCC
>Mature Secondary Structure 
TYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKS
CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHH
IIEDINPPRTQSPSNGEALARGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVI
HHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHH
REFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNI
HHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHH
VKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GLGRLK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA