| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023455
Identifier: 170023455
GI number: 170023455
Start: 1340379
End: 1341113
Strand: Reverse
Name: 170023455
Synonym: YPK_1209
Alternate gene names: NA
Gene position: 1341113-1340379 (Counterclockwise)
Preceding gene: 170023456
Following gene: 170023454
Centisome position: 28.6
GC content: 51.7
Gene sequence:
>735_bases ATGAGCCTTGAAACGAACCTTGAACTAAACAACAAACTGGTTGCAGAACAAAACACGTTACTAACGCAGCTTCTGGTGGC GATGGCAGCCGGCAAACCGGCTTTTACCCCTGACACTAAGCCGGTACCAAAAGCGAAAACCGTTGGCGCGGATGTCAGCA ACACAACTTTCGAGCCGATTGACTTTGAAACGCTGGATTACCAGCTGGTAGCCTGTCTGGCTGTGCTGTTCGGCAGCGAA GCCGAAACACTGACAGAAGAACGGTTAACGCAAGCTCATGCGCTAATCAATTCGGATGAAGAAACCATCCCCGCGGCCAA AGCATCCGCGCTGCATGAAGCGATGGCCGAGCACGTACAACGCACCAAGATGTACCGCAAGGCTTACTTTGATATTGCCC TGCATGTGCTCAACCTGTGGGATCAGTTGGATGGCGCTACCGCGCGAAGTGAGTTCATCGAAAAGCTGATAGTAGAACCC CACGACAAACGCGCAGCGGTTAAGCCTAAGGCGGAGAAAAAGACCAAAAAAGAAACCACCACACCTGAGCCGGAAAACGA TACCGAAGCCCTGTTCAAAAAAGCCGAAGGGCGGATTTTGCAGCTGGCAAAAGGTGGCTATCGCAGTGAAGCAGTAGCGA TTCTGGACAAATTTGGTGCTAAAAAGCTGGGGCAAGTCCCCGCTGACAAATTACCGGAAGCTATCGCACTGGCTGAAAAA GCGTTGGAGGGCTAA
Upstream 100 bases:
>100_bases GGTGCCGATTTTAGTCAACATCCGTCCCCGTCTGGCGTTCTGTACCCGCTTTGTCTTCTGTGCGTCGCCCTATTCCTCTT CTATTTAGCGAGATAATCCT
Downstream 100 bases:
>100_bases CCATGCCGGAACAACATGCAAGATTGTCTCCGTCTGGTGCACATCGGTGGATGCGCTGTAGCGGAAGCCTCGCGTTAGAA GCGGGGATAAAAGATACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSLETNLELNNKLVAEQNTLLTQLLVAMAAGKPAFTPDTKPVPKAKTVGADVSNTTFEPIDFETLDYQLVACLAVLFGSE AETLTEERLTQAHALINSDEETIPAAKASALHEAMAEHVQRTKMYRKAYFDIALHVLNLWDQLDGATARSEFIEKLIVEP HDKRAAVKPKAEKKTKKETTTPEPENDTEALFKKAEGRILQLAKGGYRSEAVAILDKFGAKKLGQVPADKLPEAIALAEK ALEG
Sequences:
>Translated_244_residues MSLETNLELNNKLVAEQNTLLTQLLVAMAAGKPAFTPDTKPVPKAKTVGADVSNTTFEPIDFETLDYQLVACLAVLFGSE AETLTEERLTQAHALINSDEETIPAAKASALHEAMAEHVQRTKMYRKAYFDIALHVLNLWDQLDGATARSEFIEKLIVEP HDKRAAVKPKAEKKTKKETTTPEPENDTEALFKKAEGRILQLAKGGYRSEAVAILDKFGAKKLGQVPADKLPEAIALAEK ALEG >Mature_243_residues SLETNLELNNKLVAEQNTLLTQLLVAMAAGKPAFTPDTKPVPKAKTVGADVSNTTFEPIDFETLDYQLVACLAVLFGSEA ETLTEERLTQAHALINSDEETIPAAKASALHEAMAEHVQRTKMYRKAYFDIALHVLNLWDQLDGATARSEFIEKLIVEPH DKRAAVKPKAEKKTKKETTTPEPENDTEALFKKAEGRILQLAKGGYRSEAVAILDKFGAKKLGQVPADKLPEAIALAEKA LEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26709; Mature: 26578
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLETNLELNNKLVAEQNTLLTQLLVAMAAGKPAFTPDTKPVPKAKTVGADVSNTTFEPI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC DFETLDYQLVACLAVLFGSEAETLTEERLTQAHALINSDEETIPAAKASALHEAMAEHVQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHH RTKMYRKAYFDIALHVLNLWDQLDGATARSEFIEKLIVEPHDKRAAVKPKAEKKTKKETT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC TPEPENDTEALFKKAEGRILQLAKGGYRSEAVAILDKFGAKKLGQVPADKLPEAIALAEK CCCCCCHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALEG HHCC >Mature Secondary Structure SLETNLELNNKLVAEQNTLLTQLLVAMAAGKPAFTPDTKPVPKAKTVGADVSNTTFEPI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC DFETLDYQLVACLAVLFGSEAETLTEERLTQAHALINSDEETIPAAKASALHEAMAEHVQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHH RTKMYRKAYFDIALHVLNLWDQLDGATARSEFIEKLIVEPHDKRAAVKPKAEKKTKKETT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC TPEPENDTEALFKKAEGRILQLAKGGYRSEAVAILDKFGAKKLGQVPADKLPEAIALAEK CCCCCCHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALEG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA